RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 NOP2P46087 812 aaKnown RBP20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 RNASE9P60153 205 aaKnown RBP20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 TEAD2Q15562 447 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 LRRC38Q5VT99 294 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 NUGGCQ68CJ6 796 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 TXNDC8Q6A555 127 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 SND1Q7KZF4 910 aaKnown RBP eCLIP20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 OTOP3Q7RTS5 596 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 EMC1Q8N766 993 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 TRIM58Q8NG06 486 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 MAFAQ8NHW3 353 aaPredicted RBP20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 EDEM1Q92611 657 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 FGF13Q92913 245 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 NTAN1Q96AB6 310 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 TBCBQ99426 244 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 KLF16Q9BXK1 252 aaPredicted RBP20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 CCSER2Q9H7U1 834 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 EPS15L1Q9UBC2 864 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 PYCARDQ9ULZ3 195 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 ZNF510Q9Y2H8 683 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 DENND4AQ7Z401 1863 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 C2orf78A6NCI8 922 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 M0QYT0 321 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 KCNA5P22460 613 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 MSNP26038 577 aaKnown RBP20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 CCR1P32246 355 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 AVPR1AP37288 418 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 ZNF135P52742 658 aaPredicted RBP20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 NTHL1P78549 312 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 OGDHQ02218 1023 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 ZNF252P-AS1Q0IIN9 211 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 SMAD2Q15796 467 aaKnown RBP20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 AAK1Q2M2I8 961 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 POLNQ7Z5Q5 900 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 MAB21L3Q8N8X9 362 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 ITFG1Q8TB96 612 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 NXPE3Q969Y0 559 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 ZFRQ96KR1 1074 aaKnown RBP20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 CFAP57Q96MR6 1250 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 NACA2Q9H009 215 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 RNF38Q9H0F5 515 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 TDP1Q9NUW8 608 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 SALL4Q9UJQ4 1053 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 DUSP10Q9Y6W6 482 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 BRWD1Q9NSI6 2320 aa20.56■□□□□ 0.88
SCAMP3-209ENST00000497470 CDH23Q9H251 3354 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 ABL1P00519 1130 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 TUBB4AP04350 444 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 CEBPBP17676 345 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 SULT1E1P49888 294 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 CYP4F8P98187 520 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 DEUP1Q05D60 604 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 SCAPQ12770 1279 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 SKIV2LQ15477 1246 aaKnown RBP20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 BOLA3Q53S33 107 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 OTUD1Q5VV17 481 aaPredicted RBP20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 HTR3DQ70Z44 454 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 TAC4Q86UU9 113 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 PLCD3Q8N3E9 789 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 LRRC57Q8N9N7 239 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 SMARCD2Q92925 531 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 ASB16Q96NS5 453 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 POMKQ9H5K3 350 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 DDIT4Q9NX09 232 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 SLC12A6Q9UHW9 1150 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 STOML2Q9UJZ1 356 aa20.55■□□□□ 0.88
SCAMP3-209ENST00000497470 E2F8A0AVK6 867 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 LRCH4O75427 683 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 CKMP06732 381 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 HDAC4P56524 1084 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 TBX4P57082 545 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 EFEMP1Q12805 493 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 CCDC85BQ15834 202 aaPredicted RBP20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 HADHQ16836 314 aaKnown RBP20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 ARL13BQ3SXY8 428 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 EP400NLQ6ZTU2 488 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 PHLDB2Q86SQ0 1253 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 CELF5Q8N6W0 485 aaKnown RBP20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 ARL14EPQ8N8R7 260 aaPredicted RBP20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 FAM172AQ8WUF8 416 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 TEKT4Q8WW24 435 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 ACSF2Q96CM8 615 aaPredicted RBP20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 OTUB2Q96DC9 234 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 C1orf74Q96LT6 269 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 ALS2CR12Q96Q35 445 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 HAPLN3Q96S86 360 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 PHF7Q9BWX1 381 aaPredicted RBP20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 RETREG1Q9H6L5 497 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 FAM204AQ9H8W3 233 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 ARHGEF38Q9NXL2 777 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 GUCA1BQ9UMX6 200 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 NR2E1Q9Y466 385 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 DOCK6Q96HP0 2047 aa20.54■□□□□ 0.88
SCAMP3-209ENST00000497470 GRXCR2A6NFK2 248 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 KCNU1A8MYU2 1149 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 BUB1BO60566 1050 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 GJB6O95452 261 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 MBL2P11226 248 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 LAMP2P13473 410 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 HTR7P34969 479 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms