RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 FAM200BP0CF97 657 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 RARBP10826 455 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 GOT1P17174 413 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 TPSB2P20231 275 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 GJA9P57773 515 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 SLC10A2Q12908 348 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-220ENST00000496711 TPSAB1Q15661 275 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 HHATQ5VTY9 493 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-220ENST00000496711 HEATR6Q6AI08 1181 aaKnown RBP13.52□□□□□ -0.25
GARNL3-220ENST00000496711 KCNT2Q6UVM3 1135 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 AGGF1Q8N302 714 aaeCLIP13.52□□□□□ -0.25
GARNL3-220ENST00000496711 MCUQ8NE86 351 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 ALKBH8Q96BT7 664 aaKnown RBP13.52□□□□□ -0.25
GARNL3-220ENST00000496711 CFAP36Q96G28 342 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 PITPNM3Q9BZ71 974 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 MAGEB5Q9BZ81 275 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 PRDM16Q9HAZ2 1276 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 POPDC2Q9HBU9 364 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 KRT82Q9NSB4 513 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 DDX43Q9NXZ2 648 aaKnown RBP13.52□□□□□ -0.25
GARNL3-220ENST00000496711 ST3GAL5Q9UNP4 418 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 IKBKGQ9Y6K9 419 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 PATJQ8NI35 1801 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 MEIS3P2A8K0S8 358 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 HACD1B0YJ81 288 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 PIAS1O75925 651 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 BEST1O76090 585 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 INHBAP08476 426 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 CYBAP13498 195 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 NOS2P35228 1153 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 PTK7Q13308 1070 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 SLC1A5Q15758 541 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 DCAF6Q58WW2 860 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 GNASQ5JWF2 1037 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 FAM47EQ6ZV65 393 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 BNIPLQ7Z465 357 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 CAND1Q86VP6 1230 aaKnown RBP13.51□□□□□ -0.25
GARNL3-220ENST00000496711 PYROXD2Q8N2H3 581 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 TMEM86AQ8N2M4 240 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 LRRC8CQ8TDW0 803 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 LRRN4Q8WUT4 740 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 SLC44A1Q8WWI5 657 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 NDRG1Q92597 394 aaKnown RBP13.51□□□□□ -0.25
GARNL3-220ENST00000496711 LRRC39Q96DD0 335 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 SENP8Q96LD8 212 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 OLFM3Q96PB7 478 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 SLC2A13Q96QE2 648 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 NPY6RQ99463 290 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 SENP6Q9GZR1 1112 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-220ENST00000496711 CHST12Q9NRB3 414 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
GARNL3-220ENST00000496711 DTLQ9NZJ0 730 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 PRKAG3Q9UGI9 489 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 GRID1Q9ULK0 1009 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 TTLL3Q9Y4R7 772 aa13.51□□□□□ -0.25
GARNL3-220ENST00000496711 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-220ENST00000496711 H3BRJ5 948 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 TM9SF1O15321 606 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 THP07101 528 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 SLC10A3P09131 477 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 CTSHP09668 335 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 AMPD1P23109 780 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 LHX1P48742 406 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 DNAJC3Q13217 504 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 CRHR2Q13324 411 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 NBPF20Q3BBV1 942 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 FAM182AQ5T1J6 154 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 LVRNQ6Q4G3 990 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 BZW1Q7L1Q6 419 aaKnown RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 GBP7Q8N8V2 638 aaPredicted RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 GSTCDQ8NEC7 633 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 TFB1MQ8WVM0 346 aaKnown RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 GAD1Q99259 594 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 CRTAC1Q9NQ79 661 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 ARHGEF4Q9NR80 690 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 CACNG4Q9UBN1 327 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 ZC3H7BQ9UGR2 993 aaKnown RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 STARD13Q9Y3M8 1113 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 PTPRDP23468 1912 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 MYO18AQ92614 2054 aaKnown RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 SF3B1O75533 1304 aaKnown RBP eCLIP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 MFSD11O43934 449 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 DGKIO75912 1065 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 FBXO21O94952 628 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 METTL18O95568 372 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 GSTA2P09210 222 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 CTGFP29279 349 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 MAGEA3P43357 314 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 TKTL1P51854 596 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 MAP3K7CLP57077 242 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms