RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TRIML2Q8N7C3 387 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 C7orf31Q8N865 590 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF564Q8TBZ8 553 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 IFT81Q8WYA0 676 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 RIN2Q8WYP3 895 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PAWRQ96IZ0 340 aaKnown RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 TSC22D3Q99576 134 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 APBA2Q99767 749 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 TRIM31Q9BZY9 425 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 SEMA4AQ9H3S1 761 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ZWILCHQ9H900 591 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ARFGAP3Q9NP61 516 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 KRT82Q9NSB4 513 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 HESX1Q9UBX0 185 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ANAPC7Q9UJX3 599 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 MKL2Q9ULH7 1088 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 USTQ9Y2C2 406 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 NRCAMQ92823 1304 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 TRIM43BA6NCK2 446 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 CDK2AP1O14519 115 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 VSIG8P0DPA2 414 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 HOXD8P13378 290 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 PAFAH1B1P43034 410 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 SNX17Q15036 470 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 KIAA1614Q5VZ46 1190 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 FAM109BQ6ICB4 259 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 CEP57Q86XR8 500 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 WDTC1Q8N5D0 677 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ARRDC4Q8NCT1 418 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 UBA3Q8TBC4 463 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 HES6Q96HZ4 224 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ACAP3Q96P50 834 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 FUT8Q9BYC5 575 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 AP5M1Q9H0R1 490 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 NRDE2Q9H7Z3 1164 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 CYTH4Q9UIA0 394 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 AMFRQ9UKV5 643 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 NOC2LQ9Y3T9 749 aaKnown RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 LRRC37A2A6NM11 1700 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ARID2Q68CP9 1835 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 TTC34A8MYJ7 566 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 DDX3YO15523 660 aaKnown RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ASAP2O43150 1006 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 RAD51CO43502 376 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 SPOPO43791 374 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 RECQL4O94761 1208 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 FAM153BP0C7A2 387 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 PYGMP11217 842 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 EZRP15311 586 aaKnown RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 NSFP46459 744 aaKnown RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 CARSP49589 748 aaKnown RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 RABGGTBP53611 331 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ADAM17P78536 824 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 GUCY2DQ02846 1103 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 CLEC16AQ2KHT3 1053 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 FAM153CQ494X1 144 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ACAD10Q6JQN1 1059 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 GDF6Q6KF10 455 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 DGLUCYQ7Z3D6 616 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ANKS1BQ7Z6G8 1248 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 SLFN11Q7Z7L1 901 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 MCOLN2Q8IZK6 566 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 USP38Q8NB14 1042 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 TEKT4Q8WW24 435 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 LPPQ93052 612 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ANKRD36BP1Q96IX9 119 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 PIWIL1Q96J94 861 aaKnown RBP6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ALPK1Q96QP1 1244 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 CCT7Q99832 543 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 UQCC2Q9BRT2 126 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 HERPUD2Q9BSE4 406 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 HEMGNQ9BXL5 484 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 NIF3L1Q9GZT8 377 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 TCF7L2Q9NQB0 619 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 ADAM22Q9P0K1 906 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 PARP2Q9UGN5 583 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 FAM153AQ9UHL3 310 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 NME7Q9Y5B8 376 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 SNX9Q9Y5X1 595 aa6.43□□□□□ -1.38
SSBP1-213ENST00000496622 MROH7Q68CQ1 1323 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 TMEM238LA0A1B0GVL6 79 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 A0A1W2PQ67 120 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 MBLAC1A4D2B0 266 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-213ENST00000496622 KRIT1O00522 736 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 SOX1O00570 391 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-213ENST00000496622 TTI1O43156 1089 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 B4GALT4O60513 344 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 SNX2O60749 519 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 GRAP2O75791 330 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 TNNC2P02585 160 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 S100BP04271 92 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-213ENST00000496622 ASGR1P07306 291 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 UBL4AP11441 157 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 DARSP14868 501 aaKnown RBP6.42□□□□□ -1.38
SSBP1-213ENST00000496622 CES1P23141 567 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 HPDP32754 393 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-213ENST00000496622 KCNJ1P48048 391 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 NOMO3P69849 1222 aa6.42□□□□□ -1.38
SSBP1-213ENST00000496622 GBE1Q04446 702 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms