RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TSGA10Q9BZW7 698 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 LACRTQ9GZZ8 138 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 FAM204AQ9H8W3 233 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 TDP1Q9NUW8 608 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 ARHGAP26Q9UNA1 814 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 TFR2Q9UP52 801 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 HBS1LQ9Y450 684 aaKnown RBP22.69■■□□□ 1.22
C9orf3-222ENST00000496567 NR2E1Q9Y466 385 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 M0QYT0 321 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 MTA2O94776 668 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 F9P00740 461 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 LAMP2P13473 410 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 NOP2P46087 812 aaKnown RBP22.68■■□□□ 1.22
C9orf3-222ENST00000496567 TAC4Q86UU9 113 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 DDX42Q86XP3 938 aaKnown RBP eCLIP22.68■■□□□ 1.22
C9orf3-222ENST00000496567 ASB16Q96NS5 453 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 KIF9Q9HAQ2 790 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 OSGEPQ9NPF4 335 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 DDIT4Q9NX09 232 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 IP6K2Q9UHH9 426 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 PPP2R2CQ9Y2T4 447 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 CPQQ9Y646 472 aa22.68■■□□□ 1.22
C9orf3-222ENST00000496567 SLC12A8A0AV02 714 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 KRT86O43790 486 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 IGLV3-25P01717 112 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 PSMA2P25787 234 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 POTEHQ6S545 545 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 SND1Q7KZF4 910 aaKnown RBP eCLIP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 ADAM32Q8TC27 787 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 TBCBQ99426 244 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 KLF16Q9BXK1 252 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 TRIM7Q9C029 511 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 TRPV4Q9HBA0 871 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 EPS15L1Q9UBC2 864 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 TLR6Q9Y2C9 796 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 IRAK2O43187 625 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 ARHGAP25P42331 645 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 HADHBP55084 474 aaKnown RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 PITX1P78337 314 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 ATP11AP98196 1134 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 OGDHQ02218 1023 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 DEUP1Q05D60 604 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 PIGHQ14442 188 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 ACAP1Q15027 740 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 TRIP4Q15650 581 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 FAM78AQ5JUQ0 283 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 ZNF662Q6ZS27 426 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 STRADAQ7RTN6 431 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 PLCD3Q8N3E9 789 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 TDRD5Q8NAT2 981 aaKnown RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 CENPIQ92674 756 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 USP13Q92995 863 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 SMPD4Q9NXE4 827 aa22.67■■□□□ 1.22
C9orf3-222ENST00000496567 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.67■■□□□ 1.22
C9orf3-222ENST00000496567 CCP110O43303 1012 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 ZSCAN12O43309 604 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 MSI1O43347 362 aaKnown RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 ENDOD1O94919 500 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 RDXP35241 583 aaKnown RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 NME3Q13232 169 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 CDO1Q16878 200 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 C15orf59Q2T9L4 293 aaPredicted RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 HS1BP3Q53T59 392 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 BNIPLQ7Z465 357 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 CELF5Q8N6W0 485 aaKnown RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 FAM172AQ8WUF8 416 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 E2F7Q96AV8 911 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 PLD4Q96BZ4 506 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 TRIM44Q96DX7 344 aaPredicted RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 ZFRQ96KR1 1074 aaKnown RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 NCAPGQ9BPX3 1015 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 SMG9Q9H0W8 520 aaKnown RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 PAXBP1Q9Y5B6 917 aa22.66■■□□□ 1.22
C9orf3-222ENST00000496567 NUP210Q8TEM1 1887 aaPredicted RBP22.66■■□□□ 1.22
C9orf3-222ENST00000496567 SYNJ2BP-COX16A0A087WUM0 186 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 RNF8O76064 485 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 PRAMEF12O95522 483 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 TCF3P15923 654 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 TFE3P19532 575 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-222ENST00000496567 NAP1L1P55209 391 aaKnown RBP22.65■■□□□ 1.22
C9orf3-222ENST00000496567 TBX4P57082 545 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 RING1Q06587 406 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 EIF4EBP2Q13542 120 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-222ENST00000496567 IFI16Q16666 785 aaKnown RBP22.65■■□□□ 1.22
C9orf3-222ENST00000496567 OTUD1Q5VV17 481 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-222ENST00000496567 MTSS1LQ765P7 747 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 ZFP14Q9HCL3 533 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 GKN1Q9NS71 199 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 OBP2AQ9NY56 170 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 COX16Q9P0S2 106 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 DUSP10Q9Y6W6 482 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 DOCK8Q8NF50 2099 aa22.65■■□□□ 1.22
C9orf3-222ENST00000496567 PRUNE2Q8WUY3 3088 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 LEFTY2O00292 366 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 SLC2A3P11169 496 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 IL9P15248 144 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 SP100P23497 879 aaPredicted RBP22.64■■□□□ 1.22
C9orf3-222ENST00000496567 ZNF252P-AS1Q0IIN9 211 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 ARHGAP29Q52LW3 1261 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 NUGGCQ68CJ6 796 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms