RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 TMEM110Q86TL2 294 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 PIGZQ86VD9 579 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
CDCA7-208ENST00000496441 GBP7Q8N8V2 638 aaPredicted RBP11.95□□□□□ -0.5
CDCA7-208ENST00000496441 SHCBP1Q8NEM2 672 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 TSSK1BQ9BXA7 367 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 ARMCX1Q9P291 453 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 ZFP69BQ9UJL9 534 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 KCNK1O00180 336 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 HUS1O60921 280 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 ENDOD1O94919 500 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 UNC5CO95185 931 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 CSH1P0DML2 217 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 CSH2P0DML3 217 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 EPHB2P29323 1055 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 MAP3K7CLP57077 242 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 PDK2Q15119 407 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 LDLRAD1Q5T700 205 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 RNF43Q68DV7 783 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 RFX8Q6ZV50 586 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 MZB1Q8WU39 189 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 CSPG4P5Q96PW8 444 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 SRPK1Q96SB4 655 aaKnown RBP11.95□□□□□ -0.5
CDCA7-208ENST00000496441 FLRT1Q9NZU1 646 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 HEY2Q9UBP5 337 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
CDCA7-208ENST00000496441 WDR27A2RRH5 827 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 I3L4J1 428 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 DARSP14868 501 aaKnown RBP11.94□□□□□ -0.5
CDCA7-208ENST00000496441 EZRP15311 586 aaKnown RBP11.94□□□□□ -0.5
CDCA7-208ENST00000496441 CPA2P48052 419 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 POU5F1BQ06416 359 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 BST2Q10589 180 aaKnown RBP11.94□□□□□ -0.5
CDCA7-208ENST00000496441 PPP2R5DQ14738 602 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 PKDCCQ504Y2 493 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 SYPL2Q5VXT5 272 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 UNC5AQ6ZN44 842 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 HFE2Q6ZVN8 426 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 PLEKHH3Q7Z736 793 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 TTC7BQ86TV6 843 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 TLK2Q86UE8 772 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 IFNLR1Q8IU57 520 aaPredicted RBP11.94□□□□□ -0.5
CDCA7-208ENST00000496441 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 DEPDC1BQ8WUY9 529 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 LPPQ93052 612 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 GRAMD1AQ96CP6 724 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 KIAA1257Q9ULG3 409 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 FAM237BA0A1B0GVD1 139 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 SLC15A5A6NIM6 579 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 M0QYT0 321 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 STRNO43815 780 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 ABCG1P45844 678 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 NUMBP49757 651 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 SNX17Q15036 470 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 WSCD1Q658N2 575 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 ZNF410Q86VK4 478 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 C10orf82Q8WW14 230 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 KCNK16Q96T55 309 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 RHOBTB2Q9BYZ6 727 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 DTLQ9NZJ0 730 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 TTLL3Q9Y4R7 772 aa11.94□□□□□ -0.5
CDCA7-208ENST00000496441 CFAP73A6NFT4 308 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 CHADO15335 359 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 TROVE2P10155 538 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDCA7-208ENST00000496441 SERPINB3P29508 390 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 ARL4AP40617 200 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 BCAT1P54687 386 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 GPR162Q16538 588 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 C16orf46Q6P387 395 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 SLC26A11Q86WA9 606 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 ANKRD52Q8NB46 1076 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 UTP4Q969X6 686 aaKnown RBP11.93□□□□□ -0.5
CDCA7-208ENST00000496441 FRMD8P1Q9BZ68 369 aaPredicted RBP11.93□□□□□ -0.5
CDCA7-208ENST00000496441 POPDC2Q9HBU9 364 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 MTMR10Q9NXD2 777 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 UBQLN1Q9UMX0 589 aaKnown RBP11.93□□□□□ -0.5
CDCA7-208ENST00000496441 CAPN9O14815 690 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 MFSD11O43934 449 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 VAV1P15498 845 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 GSCP56915 257 aaPredicted RBP11.93□□□□□ -0.5
CDCA7-208ENST00000496441 TMPRSS15P98073 1019 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 MFSD10Q14728 455 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 OSTM1Q86WC4 334 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 NDUFAF2Q8N183 169 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 EDEM1Q92611 657 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 PLCD4Q9BRC7 762 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 PLAC1Q9HBJ0 212 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 ARHGEF3Q9NR81 526 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDCA7-208ENST00000496441 NDC80O14777 642 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 KRT37O76014 449 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 TGM2P21980 687 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 TAF6P49848 677 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 LILRA4P59901 499 aa11.93□□□□□ -0.5
CDCA7-208ENST00000496441 KYAT1Q16773 422 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms