RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	SV2B	Q7L1I2	683 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	TMPRSS7	Q7RTY8	843 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	GLRX5	Q86SX6	157 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	FAM124A	Q86V42	546 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	WDR49	Q8IV35	697 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	RHBDD1	Q8TEB9	315 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	P2RY11	Q96G91	374 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	CLIC6	Q96NY7	704 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	XPO6	Q96QU8	1125 aa	Known RBP	8.29	□□□□□ -1.08
NVL-223	ENST00000496393	PANK2	Q9BZ23	570 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	ZDHHC5	Q9C0B5	715 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	MKRN2	Q9H000	416 aa	Known RBP	8.29	□□□□□ -1.08
NVL-223	ENST00000496393	DMAP1	Q9NPF5	467 aa	Predicted RBP	8.29	□□□□□ -1.08
NVL-223	ENST00000496393	OLFML3	Q9NRN5	406 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	PANK4	Q9NVE7	773 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	HSPBP1	Q9NZL4	362 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	STK17A	Q9UEE5	414 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	CCDC39	Q9UFE4	941 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	EIF2B4	Q9UI10	523 aa	Known RBP	8.29	□□□□□ -1.08
NVL-223	ENST00000496393	NUDT5	Q9UKK9	219 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	CLIC4	Q9Y696	253 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	STON1	Q9Y6Q2	735 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	ASH1L	Q9NR48	2969 aa	Known RBP	8.29	□□□□□ -1.08
NVL-223	ENST00000496393	ATP8B3	O60423	1300 aa		8.29	□□□□□ -1.08
NVL-223	ENST00000496393	FAM187A	A6NFU0	413 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	KCNK3	O14649	394 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	GREM1	O60565	184 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	TACC1	O75410	805 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	AP1G2	O75843	785 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	CER1	O95813	267 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	BMP15	O95972	392 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	STAT6	P42226	847 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	IL12RB1	P42701	662 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	CYP2J2	P51589	502 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	CDH8	P55286	799 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	CLDN6	P56747	220 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	MYL6	P60660	151 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	IL9R	Q01113	521 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	TRPC3	Q13507	836 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	ALCAM	Q13740	583 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	SURF1	Q15526	300 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	DHRS13	Q6UX07	377 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	BAHD1	Q8TBE0	780 aa	Predicted RBP	8.28	□□□□□ -1.08
NVL-223	ENST00000496393	DNASE2B	Q8WZ79	361 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	OVCA2	Q8WZ82	227 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	SMARCD1	Q96GM5	515 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	TMX3	Q96JJ7	454 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	CGRRF1	Q99675	332 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393	WSB2	Q9NYS7	404 aa	Predicted RBP	8.28	□□□□□ -1.08
NVL-223	ENST00000496393	FBXO2	Q9UK22	296 aa	Predicted RBP	8.28	□□□□□ -1.08
NVL-223	ENST00000496393	LSM7	Q9UK45	103 aa	Known RBP	8.28	□□□□□ -1.08
NVL-223	ENST00000496393	TMEM131	Q92545	1883 aa		8.28	□□□□□ -1.08
NVL-223	ENST00000496393		A0A087X0B3	334 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	FRMD3	A2A2Y4	597 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	VPS37C	A5D8V6	355 aa	Predicted RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CLIC2	O15247	247 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	ST8SIA5	O15466	376 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	FLRT2	O43155	660 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CYP26A1	O43174	497 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	C1QL1	O75973	258 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	BEST1	O76090	585 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CD2BP2	O95400	341 aa	Known RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CISD3	P0C7P0	127 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	ZDHHC11B	P0C7U3	371 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	PRKCH	P24723	683 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	ITPKB	P27987	946 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	HOXD13	P35453	343 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	TXLNA	P40222	546 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	ABCG1	P45844	678 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CASP4	P49662	377 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CSNK1E	P49674	416 aa	Known RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	TUB	P50607	506 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	TPMT	P51580	245 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	MAP3K7CL	P57077	242 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CEBPZ	Q03701	1054 aa	Known RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	CYP24A1	Q07973	514 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	SNRNP35	Q16560	246 aa	Known RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	GEN1	Q17RS7	908 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	KIF19	Q2TAC6	998 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	KMT5B	Q4FZB7	885 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	PAQR9	Q6ZVX9	377 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	HTR3D	Q70Z44	454 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	GPRIN1	Q7Z2K8	1008 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	ACOT1	Q86TX2	421 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	TMPRSS6	Q8IU80	811 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	FUK	Q8N0W3	1084 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	PDILT	Q8N807	584 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	ZMIZ2	Q8NF64	920 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	SORCS1	Q8WY21	1168 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	SIPA1	Q96FS4	1042 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	SMO	Q99835	787 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	KLF16	Q9BXK1	252 aa	Predicted RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	SDCBP2	Q9H190	292 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	NMUR1	Q9HB89	426 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	FAM49B	Q9NUQ9	324 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	OSER1	Q9NX31	292 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	MARK1	Q9P0L2	795 aa		8.27	□□□□□ -1.09
NVL-223	ENST00000496393	KIAA1522	Q9P206	1035 aa	Predicted RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	USP36	Q9P275	1121 aa	Known RBP	8.27	□□□□□ -1.09
NVL-223	ENST00000496393	WDR35	Q9P2L0	1181 aa		8.27	□□□□□ -1.09

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms