RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 KCNJ8Q15842 424 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 HP1BP3Q5SSJ5 553 aaPredicted RBP9.36□□□□□ -0.91
HPS4-217ENST00000496385 TTC23LQ6PF05 361 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 EEPD1Q7L9B9 569 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 ATP6V0D2Q8N8Y2 350 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 USP6NLQ92738 828 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 HAS1Q92839 578 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 ACAP3Q96P50 834 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 PSTPIP2Q9H939 334 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 ARHGAP26Q9UNA1 814 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 FRMD4BQ9Y2L6 1034 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 DDX60LQ5H9U9 1706 aaKnown RBP9.36□□□□□ -0.91
HPS4-217ENST00000496385 OTOFQ9HC10 1997 aa9.36□□□□□ -0.91
HPS4-217ENST00000496385 CFAP99D6REC4 459 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 E7ESA3 106 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SNAP91O60641 907 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SPAG6O75602 509 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TRPA1O75762 1119 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 PROCP04070 461 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TFPTP0C1Z6 253 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 JAK1P23458 1154 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 MAPK4P31152 587 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 IREB2P48200 963 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 ADCY7P51828 1080 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TMPRSS15P98073 1019 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 BST1Q10588 318 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 DGKZQ13574 1117 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 ACAP1Q15027 740 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 HIF1AQ16665 826 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 Q3C1V9 767 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 DCAF15Q66K64 600 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 KATNAL2Q8IYT4 538 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 EXD1Q8NHP7 514 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 LMO3Q8TAP4 145 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 RMND5BQ96G75 393 aaPredicted RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 TRIM56Q9BRZ2 755 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 MROQ9BYG7 248 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 ZHX3Q9H4I2 956 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 LIN28AQ9H9Z2 209 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SATB2Q9UPW6 733 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 APOBEC2Q9Y235 224 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 IKBKGQ9Y6K9 419 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 ZHX2Q9Y6X8 837 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 CLUHO75153 1309 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 E5RJQ4 531 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SLC22A1O15245 554 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 EDIL3O43854 480 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A9O60656 530 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 AOC2O75106 756 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 RSL1D1O76021 490 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A6P19224 532 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A1P22309 533 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A4P22310 534 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 SHMT1P34896 483 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A3P35503 534 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A5P35504 534 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 MXI1P50539 228 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 HSD17B4P51659 736 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 E2F2Q14209 437 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 FASTKD3Q14CZ7 662 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 OXA1LQ15070 435 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TEX44Q53QW1 395 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 RALGPS1Q5JS13 557 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 C6orf183Q5T699 404 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 CARM1Q86X55 608 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 CLVS1Q8IUQ0 354 aaPredicted RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 MMAAQ8IVH4 418 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TMIGD2Q96BF3 282 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 ZNF597Q96LX8 424 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 PCDHB18PQ96TA0 734 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 RTKNQ9BST9 563 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 C1orf50Q9BV19 199 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 EHD1Q9H4M9 534 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A7Q9HAW7 530 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A10Q9HAW8 530 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 UGT1A8Q9HAW9 530 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 ALG13Q9NP73 1137 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 THAP1Q9NVV9 213 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 DMAC2Q9NW81 257 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 NOCTQ9UK39 431 aaKnown RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 FAM155AB1AL88 458 aaPredicted RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 COPEO14579 308 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 RGS13O14921 159 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 PMM2O15305 246 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TGFB1I1O43294 461 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 LIASO43766 372 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 FARP2O94887 1054 aaPredicted RBP9.35□□□□□ -0.91
HPS4-217ENST00000496385 FDX1P10109 184 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 RALAP11233 206 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 ITGAXP20702 1163 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 DCKP27707 260 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 L1CAMP32004 1257 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 CDK8P49336 464 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 TRIM16LQ309B1 348 aa9.35□□□□□ -0.91
HPS4-217ENST00000496385 MDH1BQ5I0G3 518 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms