RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SCNN1GP51170 649 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 IRAK1P51617 712 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 MRPS5P82675 430 aaKnown RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 DEUP1Q05D60 604 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 ADIGQ0VDE8 80 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 DPYSL3Q14195 570 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 DPYSL2Q16555 572 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 C15orf59Q2T9L4 293 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 SLC25A52Q3SY17 297 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 CCDC14Q49A88 953 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 ANKRD20A8PQ5CZ79 823 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PPP6R3Q5H9R7 873 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 FAM26DQ5JW98 314 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 HEATR6Q6AI08 1181 aaKnown RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 SCARA3Q6AZY7 606 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 GLB1LQ6UWU2 654 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 ARHGEF18Q6ZSZ5 1173 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 FAM35AQ86V20 835 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PIGZQ86VD9 579 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 FAM160A2Q8N612 972 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 ARRDC4Q8NCT1 418 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PYROXD1Q8WU10 500 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PPP1R13LQ8WUF5 828 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 IRGQQ8WZA9 623 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 CENPTQ96BT3 561 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 ACSF2Q96CM8 615 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 TLCD1Q96CP7 247 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 CAPNS2Q96L46 248 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 FAM118BQ9BPY3 351 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 DDX23Q9BUQ8 820 aaKnown RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 CFHR5Q9BXR6 569 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 SEMA4AQ9H3S1 761 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 DHX35Q9H5Z1 703 aaKnown RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 VPS37BQ9H9H4 285 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 POPDC2Q9HBU9 364 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PCDH18Q9HCL0 1135 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 STARD7Q9NQZ5 370 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 EVA1BQ9NVM1 165 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 NKIRAS1Q9NYS0 192 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 NINJ2Q9NZG7 142 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PADI3Q9ULW8 664 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 ACTL7BQ9Y614 415 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 RAD54BQ9Y620 910 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 IKBKGQ9Y6K9 419 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 SF3B1O75533 1304 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP39-219ENST00000496047 A0A0U1RQF3 1178 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 BCLAF3A2AJT9 711 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 CASTOR2A6NHX0 329 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 E7EVH7 732 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 GABRDO14764 452 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 CHADO15335 359 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 KCNN4O15554 427 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 TCEA3O75764 348 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ENDOD1O94919 500 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 F12P00748 615 aaPredicted RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 CHRNA1P02708 482 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 CYP11A1P05108 521 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 FGFR1P11362 822 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 TCF4P15884 667 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 TYMPP19971 482 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 CYP2F1P24903 491 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 CCND3P30281 292 aaPredicted RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 STX2P32856 288 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 LSP1P33241 339 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 SERPINB6P35237 376 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 CHKAP35790 457 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 FDFT1P37268 417 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 CLCNKBP51801 687 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 TKTL1P51854 596 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ACLYP53396 1101 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 YWHAZP63104 245 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 SOX4Q06945 474 aaPredicted RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 PDIA2Q13087 525 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 BFSP2Q13515 415 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 SEPT7Q16181 437 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 DCAF6Q58WW2 860 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 RNASEH2BQ5TBB1 312 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 WSCD1Q658N2 575 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 SLC9A4Q6AI14 798 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 TXNRD3NBQ6F5E7 133 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 C1orf228Q6PIY5 440 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 LIMS2Q7Z4I7 341 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 PALM2Q8IXS6 379 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 CCDC13Q8IYE1 715 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ZBED8Q8IZ13 594 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 DCP1BQ8IZD4 617 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 ABI1Q8IZP0 508 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 VPS52Q8N1B4 723 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ANKS4BQ8N8V4 417 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 UHMK1Q8TAS1 419 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 MYCBPAPQ8TBZ2 947 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 EPS8L3Q8TE67 593 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 WNT8BQ93098 351 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ZBTB9Q96C00 473 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 FAF2Q96CS3 445 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ZFP42Q96MM3 310 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 PEBP4Q96S96 227 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 SLC9A7Q96T83 725 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ADAM2Q99965 735 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms