RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZNF33AQ06730 810 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 KIAA1211LQ6NV74 962 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 ARHGAP18Q8N392 663 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 FBXL13Q8NEE6 735 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 SEMA4DQ92854 862 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 DCLK3Q9C098 648 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 GOLPH3LQ9H4A5 285 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 CISHQ9NSE2 258 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 SLC27A6Q9Y2P4 619 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 GON4LQ3T8J9 2241 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 ZNF202O95125 648 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 PENKP01210 267 aaPredicted RBP24.4■■□□□ 1.5
COL27A1-208ENST00000494780 KLKB1P03952 638 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 CFIP05156 583 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 SERPINF2P08697 491 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 CHKAP35790 457 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 MXI1P50539 228 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 FOXC1Q12948 553 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 ARHGAP17Q68EM7 881 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 DEFB119Q8N690 84 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 DEFB124Q8NES8 71 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 BHMTQ93088 406 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 CCDC34Q96HJ3 373 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 TMEM176AQ96HP8 235 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 SLC32A1Q9H598 525 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 RAB20Q9NX57 234 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 CACNA2D2Q9NY47 1150 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 PLK2Q9NYY3 685 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 RASAL2Q9UJF2 1139 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 CYP8B1Q9UNU6 501 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 WASF3Q9UPY6 502 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 PI4KAP42356 2102 aa24.4■■□□□ 1.5
COL27A1-208ENST00000494780 PROS1P07225 676 aa24.39■■□□□ 1.49
COL27A1-208ENST00000494780 ATXN3P54252 364 aaPredicted RBP24.39■■□□□ 1.49
COL27A1-208ENST00000494780 RAD23BP54727 409 aa24.39■■□□□ 1.49
COL27A1-208ENST00000494780 GFPT1Q06210 699 aaPredicted RBP24.39■■□□□ 1.49
COL27A1-208ENST00000494780 EFEMP1Q12805 493 aa24.39■■□□□ 1.49
COL27A1-208ENST00000494780 SLC4A11Q8NBS3 891 aa24.39■■□□□ 1.49
COL27A1-208ENST00000494780 MRGPRX1Q96LB2 322 aa24.39■■□□□ 1.49
COL27A1-208ENST00000494780 CAPN10Q9HC96 672 aa24.39■■□□□ 1.49
COL27A1-208ENST00000494780 RAD54BQ9Y620 910 aa24.39■■□□□ 1.49
COL27A1-208ENST00000494780 ASCC3Q8N3C0 2202 aaKnown RBP24.39■■□□□ 1.49
COL27A1-208ENST00000494780 CEP192Q8TEP8 1941 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 UPK3BL1B0FP48 263 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 UPK3BL2E5RIL1 263 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 NPC1O15118 1278 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 CETN3O15182 167 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 EPB41P11171 864 aaKnown RBP24.38■■□□□ 1.49
COL27A1-208ENST00000494780 CORO1AP31146 461 aaKnown RBP24.38■■□□□ 1.49
COL27A1-208ENST00000494780 RAB41Q5JT25 222 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 FYB2Q5VWT5 728 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 PIGZQ86VD9 579 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 SLC41A1Q8IVJ1 513 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 P2RY11Q96G91 374 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 STRIP2Q9ULQ0 834 aa24.38■■□□□ 1.49
COL27A1-208ENST00000494780 MFAP3P55082 362 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 SLC8A3P57103 927 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 SEMA3BQ13214 749 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 PIP4P1Q86T03 277 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 HDDC3Q8N4P3 179 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 TRIML1Q8N9V2 468 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 ANKRD52Q8NB46 1076 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 ERLEC1Q96DZ1 483 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 ZNF419Q96HQ0 510 aaPredicted RBP24.37■■□□□ 1.49
COL27A1-208ENST00000494780 AGO1Q9UL18 857 aaKnown RBP24.37■■□□□ 1.49
COL27A1-208ENST00000494780 STON1Q9Y6Q2 735 aa24.37■■□□□ 1.49
COL27A1-208ENST00000494780 WASH3PC4AMC7 463 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 HMBSP08397 361 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 ZNF132P52740 706 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 YWHAGP61981 247 aaKnown RBP eCLIP24.36■■□□□ 1.49
COL27A1-208ENST00000494780 STARD3Q14849 445 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 E2F5Q15329 346 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 UNQ6494/PRO21346Q6UXR6 183 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 RSRC2Q7L4I2 434 aaKnown RBP24.36■■□□□ 1.49
COL27A1-208ENST00000494780 METTL3Q86U44 580 aaKnown RBP24.36■■□□□ 1.49
COL27A1-208ENST00000494780 SMYD4Q8IYR2 804 aaPredicted RBP24.36■■□□□ 1.49
COL27A1-208ENST00000494780 UCMAQ8WVF2 138 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 TATDN2Q93075 761 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 EEF2KMTQ96G04 330 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 HSPA12BQ96MM6 686 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 ARID3AQ99856 593 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 GTPBP2Q9BX10 602 aaKnown RBP24.36■■□□□ 1.49
COL27A1-208ENST00000494780 SLC6A17Q9H1V8 727 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 MARCH2Q9P0N8 246 aa24.36■■□□□ 1.49
COL27A1-208ENST00000494780 THAP10Q9P2Z0 257 aaPredicted RBP24.36■■□□□ 1.49
COL27A1-208ENST00000494780 NDUFS2O75306 463 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 CYBBP04839 570 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 TKTL1P51854 596 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 PM20D1Q6GTS8 502 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 KIAA1324Q6UXG2 1013 aaKnown RBP24.35■■□□□ 1.49
COL27A1-208ENST00000494780 DENND1CQ8IV53 801 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 CPXM2Q8N436 756 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 FOXJ1Q92949 421 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 FSCN3Q9NQT6 498 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 RMND1Q9NWS8 449 aa24.35■■□□□ 1.49
COL27A1-208ENST00000494780 SLC12A8A0AV02 714 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 C1QTNF9BB2RNN3 333 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 ARHGAP33O14559 1287 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 OPHN1O60890 802 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 ZBED1O96006 694 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms