RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 EGFP01133 1207 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 ARID5AQ03989 594 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 CCINQ13939 588 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 PPP2R5DQ14738 602 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 MSANTD2Q6P1R3 559 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 Q6ZNB5 142 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 ZNF677Q86XU0 584 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 TMEM25Q86YD3 366 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 NAT16Q8N8M0 369 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 PNKPQ96T60 521 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 BBS2Q9BXC9 721 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 POPDC2Q9HBU9 364 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 FBRSL1Q9HCM7 1045 aaKnown RBP16.64■□□□□ 0.25
LIME1-209ENST00000494776 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
LIME1-209ENST00000494776 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 NEDD8-MDP1E9PL57 170 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 MSI1O43347 362 aaKnown RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 KLKB1P03952 638 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 MMEP08473 750 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 CHKAP35790 457 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 OPRD1P41143 372 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 YWHAZP63104 245 aaKnown RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 CSTF1Q05048 431 aaKnown RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 FBXO43Q4G163 708 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 PREPLQ4J6C6 727 aaPredicted RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 EFHC1Q5JVL4 640 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 Q6ZS52 159 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 ERICH1Q86X53 443 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 EPS8L1Q8TE68 723 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 DDX1Q92499 740 aaKnown RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 BHMTQ93088 406 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 NAP1L5Q96NT1 182 aaPredicted RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 XPO6Q96QU8 1125 aaKnown RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 WDR35Q9P2L0 1181 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 TJP2Q9UDY2 1190 aa16.63■□□□□ 0.25
LIME1-209ENST00000494776 AGO1Q9UL18 857 aaKnown RBP16.63■□□□□ 0.25
LIME1-209ENST00000494776 A0A1B0GTH6 734 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 FAM170AA1A519 330 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 HOXC11O43248 304 aaPredicted RBP16.62■□□□□ 0.25
LIME1-209ENST00000494776 ATG13O75143 517 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 RNF40O75150 1001 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 LSM8O95777 96 aaKnown RBP16.62■□□□□ 0.25
LIME1-209ENST00000494776 ERBB2P04626 1255 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 CYBBP04839 570 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 APODP05090 189 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 CCDC172P0C7W6 258 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 EIF2DP41214 584 aaKnown RBP16.62■□□□□ 0.25
LIME1-209ENST00000494776 CXCL12P48061 93 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 SLC6A11P48066 632 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 MRE11P49959 708 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 CCR3P51677 355 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 TBX4P57082 545 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 FANCCQ00597 558 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 CDR2Q01850 454 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 KDSRQ06136 332 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 TRIP4Q15650 581 aaPredicted RBP16.62■□□□□ 0.25
LIME1-209ENST00000494776 GAB4Q2WGN9 574 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 TOGARAM2Q6ZUX3 1019 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 NUDT18Q6ZVK8 323 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 FAM183BPQ6ZVS7 135 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 C12orf40Q86WS4 652 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 UNC45BQ8IWX7 931 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 SPEM1Q8N4L4 309 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 CCDC26Q8TAB7 109 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 DQX1Q8TE96 717 aaKnown RBP16.62■□□□□ 0.25
LIME1-209ENST00000494776 SLC20A1Q8WUM9 679 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 SERPINB11Q96P15 392 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 TSPY26PQ9H489 355 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 ARHGEF4Q9NR80 690 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 FAM86C1Q9NVL1 165 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 DEC1Q9P2X7 70 aa16.62■□□□□ 0.25
LIME1-209ENST00000494776 F5P12259 2224 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 GRAP2O75791 330 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 FYNP06241 537 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 GLI1P08151 1106 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 TYRP14679 529 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 CDH5P33151 784 aaPredicted RBP16.61■□□□□ 0.25
LIME1-209ENST00000494776 UBASH3AP57075 661 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 SLC6A3Q01959 620 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 TAF5Q15542 800 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 PTPN20Q4JDL3 420 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 DCAF6Q58WW2 860 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 SYPL2Q5VXT5 272 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 NAA35Q5VZE5 725 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 NUGGCQ68CJ6 796 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 BEND5Q7L4P6 421 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 ZDHHC17Q8IUH5 632 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 ADAM32Q8TC27 787 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 CPA5Q8WXQ8 436 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 C18orf8Q96DM3 657 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 SEPT11Q9NVA2 429 aaKnown RBP16.61■□□□□ 0.25
LIME1-209ENST00000494776 DNAJC17Q9NVM6 304 aaKnown RBP16.61■□□□□ 0.25
LIME1-209ENST00000494776 ASNSD1Q9NWL6 643 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 NOCTQ9UK39 431 aaKnown RBP16.61■□□□□ 0.25
LIME1-209ENST00000494776 FBXO4Q9UKT5 387 aa16.61■□□□□ 0.25
LIME1-209ENST00000494776 A0A1W2PQC6 194 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 TBC1D3BA6NDS4 549 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 HSF2BPO75031 334 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 TULP3O75386 442 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms