RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 ZKSCAN2Q63HK3 967 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 LIN54Q6MZP7 749 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 PTCHD4Q6ZW05 846 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 KRT27Q7Z3Y8 459 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 GRASPQ7Z6J2 395 aaPredicted RBP3.18□□□□□ -1.9
LRIF1-203ENST00000494675 ZNF354CQ86Y25 554 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 CPXCR1Q8N123 301 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 GALNT15Q8N3T1 639 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 CAGE1Q8TC20 777 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 TBC1D20Q96BZ9 403 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 CTHRC1Q96CG8 243 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 PDLIM2Q96JY6 352 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 BBC3Q96PG8 261 aaPredicted RBP3.18□□□□□ -1.9
LRIF1-203ENST00000494675 FAM167BQ9BTA0 163 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 TMEM120AQ9BXJ8 343 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 BRD8Q9H0E9 1235 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 TP63Q9H3D4 680 aaPredicted RBP3.18□□□□□ -1.9
LRIF1-203ENST00000494675 SYNPO2LQ9H987 977 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 FSCN3Q9NQT6 498 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 FOXJ2Q9P0K8 574 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 LPAR3Q9UBY5 353 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 ADAMTS5Q9UNA0 930 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 PCDHGB3Q9Y5G1 929 aa3.18□□□□□ -1.9
LRIF1-203ENST00000494675 H0YIZ8 118 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 IPO5O00410 1097 aaKnown RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 CA12O43570 354 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 CBFA2T3O75081 653 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 PDE8BO95263 885 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 FGAP02671 866 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 ELFN1P0C7U0 828 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 MYCLP12524 364 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 RARRES1P49788 294 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 RENBPP51606 427 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 AP2B1P63010 937 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 MTAPQ13126 283 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 SEMA3BQ13214 749 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 BIRC3Q13489 604 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 POSTNQ15063 836 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 AASDHQ4L235 1098 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 TSTD2Q5T7W7 516 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 GRHL2Q6ISB3 625 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 JMJD6Q6NYC1 403 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 LDHAL6AQ6ZMR3 332 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 RFX8Q6ZV50 586 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 SLC29A4Q7RTT9 530 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 SMAP1Q8IYB5 467 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 FAM71DQ8N9W8 422 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 OR1N1Q8NGS0 311 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 STT3BQ8TCJ2 826 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 OTUD7AQ8TE49 926 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 LENG8Q96PV6 779 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 RTKNQ9BST9 563 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 ISCA1Q9BUE6 129 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 TFCP2L1Q9NZI6 479 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 LUZP4Q9P127 313 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 COX11Q9Y6N1 276 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 NPHP1O15259 732 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 TJP3O95049 919 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 CER1O95813 267 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 DHRS4L1P0CG22 281 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 VEGFAP15692 232 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 DRD4P21917 467 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 ADRA1DP25100 572 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 MCM5P33992 734 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 CCT5P48643 541 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 DIO1P49895 249 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 ELLP55199 621 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 TXNL4AP83876 142 aaKnown RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 DEUP1Q05D60 604 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 KCNJ12Q14500 433 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 HSP90AB4PQ58FF6 505 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 AARS2Q5JTZ9 985 aaKnown RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 CCDC144NLQ6NUI1 221 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 FBXO42Q6P3S6 717 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 PIK3AP1Q6ZUJ8 805 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 ZNF804AQ7Z570 1209 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 RASAL3Q86YV0 1011 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 CLASRPQ8N2M8 674 aaKnown RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 OVCA2Q8WZ82 227 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 RSC1A1Q92681 617 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 CINPQ9BW66 212 aaPredicted RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 FSD1LQ9BXM9 530 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 PABPC3Q9H361 631 aaKnown RBP3.17□□□□□ -1.9
LRIF1-203ENST00000494675 MLXIPQ9HAP2 919 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 USP29Q9HBJ7 922 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 SAYSD1Q9NPB0 183 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 PRDM8Q9NQV8 689 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 ASAP1Q9ULH1 1129 aa3.17□□□□□ -1.9
LRIF1-203ENST00000494675 SPATA31A6Q5VVP1 1343 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 IRAK2O43187 625 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 DHHO43323 396 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 EXOC3O60645 756 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 PPP6R2O75170 966 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 FPR3P25089 353 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 COPB1P53618 953 aaKnown RBP3.16□□□□□ -1.9
LRIF1-203ENST00000494675 LMAN2Q12907 356 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 RPS6KA2Q15349 733 aa3.16□□□□□ -1.9
LRIF1-203ENST00000494675 TAF5Q15542 800 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms