RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 EGR1P18146 543 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 MST1P26927 711 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 CTGFP29279 349 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 TACR3P29371 465 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 NTSR1P30989 418 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 GRK6P43250 576 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 MMP13P45452 471 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PPM1FP49593 454 aaPredicted RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 POLE2P56282 527 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 C21orf58P58505 322 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 TNFAIP2Q03169 654 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 CSHL1Q14406 222 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF268Q14587 947 aaPredicted RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 MAPKAPK3Q16644 382 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 CYP1B1Q16678 543 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PFKFB3Q16875 520 aaPredicted RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 FAM187BQ17R55 369 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 SLC5A9Q2M3M2 681 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PGBD2Q6P3X8 592 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 CLEC9AQ6UXN8 241 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 DPY19L3Q6ZPD9 716 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 DCDC5Q6ZRR9 648 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 KIAA0408Q6ZU52 694 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 USP49Q70CQ1 688 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF575Q86XF7 245 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF354CQ86Y25 554 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PAF1Q8N7H5 531 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 C11orf44Q8N8P7 122 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PNLDC1Q8NA58 520 aaKnown RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 SPATA5Q8NB90 893 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 GLIS1Q8NBF1 620 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 ADPRHL1Q8NDY3 354 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PRSS3P2Q8NHM4 247 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 WDR60Q8WVS4 1066 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 MUL1Q969V5 352 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 FAR2Q96K12 515 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PRR25Q96S07 402 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 MMS19Q96T76 1030 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 GDF15Q99988 308 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 NUDT22Q9BRQ3 303 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 CRB3Q9BUF7 120 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 TTLL2Q9BWV7 592 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 WDR12Q9GZL7 423 aaKnown RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 R3HDMLQ9H3Y0 253 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 AS3MTQ9HBK9 375 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 AGO4Q9HCK5 861 aaKnown RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 NECTIN3Q9NQS3 549 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 IL17RBQ9NRM6 502 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 ARL8BQ9NVJ2 186 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 VPS51Q9UID3 782 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 CDC23Q9UJX2 597 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 SLC39A10Q9ULF5 831 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 RIMKLBQ9ULI2 386 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 ZMYND8Q9ULU4 1186 aaPredicted RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 SLC27A6Q9Y2P4 619 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 UBE2J1Q9Y385 318 aaPredicted RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 DGKBQ9Y6T7 804 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 MORC2Q9Y6X9 1032 aaPredicted RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 FER1L4A9Z1Z3 1794 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF335Q9H4Z2 1342 aaPredicted RBP2.74□□□□□ -1.97
LMNB1-207ENST00000494185 A0A087WV62 115 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ZSCAN9O15535 394 aaPredicted RBP2.74□□□□□ -1.97
LMNB1-207ENST00000494185 FFAR2O15552 330 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 WDR47O94967 919 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 MT-CO3P00414 261 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ARP10275 920 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 HSD3B1P14060 373 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 PECAM1P16284 738 aaPredicted RBP2.74□□□□□ -1.97
LMNB1-207ENST00000494185 YY1P25490 414 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 RENBPP51606 427 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 JAK3P52333 1124 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 SLC12A2P55011 1212 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 HSF1Q00613 529 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 GHRHRQ02643 423 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 SRSF4Q08170 494 aaKnown RBP2.74□□□□□ -1.97
LMNB1-207ENST00000494185 BIRC3Q13489 604 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ATP1A4Q13733 1029 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ELF2Q15723 593 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 RAB30Q15771 203 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 P3H1Q32P28 736 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 PXDC1Q5TGL8 231 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 RAP1GAP2Q684P5 730 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ABLIM2Q6H8Q1 611 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 KRT27Q7Z3Y8 459 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 RASGRP3Q8IV61 690 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 NRSN1Q8IZ57 195 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 NME8Q8N427 588 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 C12orf76Q8N812 135 aaPredicted RBP2.74□□□□□ -1.97
LMNB1-207ENST00000494185 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF527Q8NB42 609 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 PIGOQ8TEQ8 1089 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 KAT2BQ92831 832 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 TRIM63Q969Q1 353 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ADGRE3Q9BY15 652 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 USP29Q9HBJ7 922 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 ERVK-5Q9HDB9 667 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 FBXO28Q9NVF7 368 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 SWAP70Q9UH65 585 aa2.74□□□□□ -1.97
LMNB1-207ENST00000494185 IPO11Q9UI26 975 aaKnown RBP2.74□□□□□ -1.97
LMNB1-207ENST00000494185 COL15A1P39059 1388 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms