RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 RLN3Q8WXF3 142 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 TCEAL3Q969E4 200 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 XPO6Q96QU8 1125 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 MED15Q96RN5 788 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 CDK5RAP1Q96SZ6 601 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 RTKNQ9BST9 563 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 SRRTQ9BXP5 876 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 LRRC4Q9HBW1 653 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 MARCH2Q9P0N8 246 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 HESX1Q9UBX0 185 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 FBXO10Q9UK96 956 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 AGO1Q9UL18 857 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 KIAA1257Q9ULG3 409 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 PCDHGA5Q9Y5G8 931 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 MYO18AQ92614 2054 aaKnown RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 A0A1W2PQF6 199 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 TCRBV21S2A2A0A5A6 115 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 SLC12A8A0AV02 714 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 BICDL2A1A5D9 508 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 BCLAF3A2AJT9 711 aaKnown RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 YJEFN3A6XGL0 299 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 E7ENQ6 273 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 PIK3R2O00459 728 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 P4HA2O15460 535 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 ALDH1A2O94788 518 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 RHOBTB1O94844 696 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 PENKP01210 267 aaPredicted RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 PAEPP09466 180 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 BRD2P25440 801 aaKnown RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 NTSR1P30989 418 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 P2RY2P41231 377 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 DGKGP49619 791 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 RGS7P49802 495 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 MARSP56192 900 aaKnown RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 CREB5Q02930 508 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 PAK1Q13153 545 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 CNGA2Q16280 664 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 CAMK4Q16566 473 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 AASDHQ4L235 1098 aaPredicted RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 FYB2Q5VWT5 728 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 BSPRYQ5W0U4 402 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 PMF1Q6P1K2 205 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 RSRC2Q7L4I2 434 aaKnown RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 DENND1CQ8IV53 801 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 C12orf50Q8NA57 414 aaPredicted RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 KCNV2Q8TDN2 545 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 SLC35F5Q8WV83 523 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 KCTD13Q8WZ19 329 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 EDEM1Q92611 657 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 ERLEC1Q96DZ1 483 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 KREMEN1Q96MU8 473 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 DCLK3Q9C098 648 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 CD248Q9HCU0 757 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 POLMQ9NP87 494 aaPredicted RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 SFMBT1Q9UHJ3 866 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 MBD1Q9UIS9 605 aaPredicted RBP10.22□□□□□ -0.77
UFD1-210ENST00000494054 CLEC4EQ9ULY5 219 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 ZNF510Q9Y2H8 683 aa10.22□□□□□ -0.77
UFD1-210ENST00000494054 WASH3PC4AMC7 463 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 TM4SF5O14894 197 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 FOXD2O60548 495 aaPredicted RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 CAVIN2O95810 425 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 GNA14O95837 355 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 AFPP02771 609 aaKnown RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 SETSIPP0DME0 302 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 LCP1P13796 627 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 HOXB2P14652 356 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 GABRG2P18507 467 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 ZNF132P52740 706 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 MFAP3P55082 362 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 DAOAP59103 153 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 TRIP4Q15650 581 aaPredicted RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 GEN1Q17RS7 908 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 PREPLQ4J6C6 727 aaPredicted RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 KIAA1211LQ6NV74 962 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 NUDT18Q6ZVK8 323 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 TRMT11Q7Z4G4 463 aaKnown RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 FMNL3Q8IVF7 1028 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 CHPFQ8IZ52 775 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 SIX6OS1Q8N1H7 587 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 PGBD3Q8N328 593 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 RBBP8NLQ8NC74 664 aaPredicted RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 IPO9Q96P70 1041 aaKnown RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 INTS2Q9H0H0 1204 aaKnown RBP10.21□□□□□ -0.77
UFD1-210ENST00000494054 VPS45Q9NRW7 570 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 KIAA1468Q9P260 1216 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.77
UFD1-210ENST00000494054 STRIP2Q9ULQ0 834 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.21□□□□□ -0.77
UFD1-210ENST00000494054 RAD54BQ9Y620 910 aa10.21□□□□□ -0.77
UFD1-210ENST00000494054 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.2□□□□□ -0.78
UFD1-210ENST00000494054 PATE3B3GLJ2 98 aa10.2□□□□□ -0.78
UFD1-210ENST00000494054 M0QYV0 167 aa10.2□□□□□ -0.78
UFD1-210ENST00000494054 MSI1O43347 362 aaKnown RBP10.2□□□□□ -0.78
UFD1-210ENST00000494054 CHKAP35790 457 aa10.2□□□□□ -0.78
UFD1-210ENST00000494054 PTGER3P43115 390 aa10.2□□□□□ -0.78
UFD1-210ENST00000494054 DHPSP49366 369 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms