RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ENOSF1Q7L5Y1 443 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 TMEM174Q8WUU8 243 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 KBTBD7Q8WVZ9 684 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 VCPIP1Q96JH7 1222 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 BIRC8Q96P09 236 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 LENG8Q96PV6 779 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 CDRT15Q96T59 188 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 FAM213AQ9BRX8 229 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 SLC38A7Q9NVC3 462 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 EPS15L1Q9UBC2 864 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 STK39Q9UEW8 545 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 C7orf72A4D263 438 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 CPA3P15088 417 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 TSHRP16473 764 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 PTPN1P18031 435 aaKnown RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 CRHR1P34998 444 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 NUDT2P50583 147 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 STAT2P52630 851 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 C1QBPQ07021 282 aaKnown RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 FAM102BQ5T8I3 360 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 LRRC38Q5VT99 294 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ZBTB46Q86UZ6 589 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 LZTR1Q8N653 840 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ADCY4Q8NFM4 1077 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 DCAF4Q8WV16 495 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 USP13Q92995 863 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 VPS50Q96JG6 964 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 HAUS8Q9BT25 410 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 SLC2A11Q9BYW1 496 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 TBX20Q9UMR3 447 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 TRIM17Q9Y577 477 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 CNTNAP2Q9UHC6 1331 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 COL24A1Q17RW2 1714 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 FUCA1P04066 466 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 FGF3P11487 239 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-210ENST00000493582 ACO1P21399 889 aaKnown RBP12.07□□□□□ -0.48
HDAC4-210ENST00000493582 IL1R2P27930 398 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 SERPINB5P36952 375 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 GTF2IP78347 998 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 CD300CQ08708 224 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 NFIAQ12857 509 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 SLC39A4Q6P5W5 647 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 DHRS4L2Q6PKH6 230 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 ARCQ7LC44 396 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 CLVS1Q8IUQ0 354 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-210ENST00000493582 BHLHE22Q8NFJ8 381 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-210ENST00000493582 FAF2Q96CS3 445 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 MFSD14AQ96MC6 490 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 WDR11Q9BZH6 1224 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 SEMA6AQ9H2E6 1030 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 DGKIO75912 1065 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 KRT38O76015 456 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 OCM2P0CE71 109 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 OCMP0CE72 109 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-210ENST00000493582 GSTT2P0CG29 244 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 TNNI1P19237 187 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 TCN1P20061 433 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-210ENST00000493582 MMP8P22894 467 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 ALDH3B2P48448 385 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 SOX10P56693 466 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 CTBSQ01459 385 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 DCAF6Q58WW2 860 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 CYP4A22Q5TCH4 519 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 DNAJC24Q6P3W2 148 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 POTEAQ6S8J7 498 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 OLFML1Q6UWY5 402 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 NPNTQ6UXI9 565 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 AGR3Q8TD06 166 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 TEKT3Q9BXF9 490 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 NUF2Q9BZD4 464 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 KLC2Q9H0B6 622 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 RAB6BQ9NRW1 208 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 SLC9A2Q9UBY0 812 aa12.07□□□□□ -0.48
HDAC4-210ENST00000493582 MATN2O00339 956 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 H6PDO95479 791 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 MAPTP10636 758 aaKnown RBP12.06□□□□□ -0.48
HDAC4-210ENST00000493582 P4HA1P13674 534 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 GMPRP36959 345 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 SCNN1DP51172 638 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 WNT7BP56706 349 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 NUP107P57740 925 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 CREB5Q02930 508 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 KLF10Q13118 480 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 PDE1CQ14123 709 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-210ENST00000493582 PPP2R5DQ14738 602 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 PPM1LQ5SGD2 360 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 DCDC5Q6ZRR9 648 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 DEPTORQ8TB45 409 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 SPATA18Q8TC71 538 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 TMC2Q8TDI7 906 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 LRRN4Q8WUT4 740 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 NEURL2Q9BR09 285 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 PCSK1NQ9UHG2 260 aa12.06□□□□□ -0.48
HDAC4-210ENST00000493582 PADI4Q9UM07 663 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms