RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FAM200BP0CF97 657 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 TRIM21P19474 475 aaKnown RBP18.61■□□□□ 0.57
NUP50-218ENST00000493456 TPMTP51580 245 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 E2F4Q16254 413 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 FAM173BQ6P4H8 233 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 DBX2Q6ZNG2 339 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 UNC93AQ86WB7 457 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 CRYBG2Q8N1P7 616 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 GALNT15Q8N3T1 639 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 HNRNPLLQ8WVV9 542 aaKnown RBP18.61■□□□□ 0.57
NUP50-218ENST00000493456 PRCCQ92733 491 aaPredicted RBP18.61■□□□□ 0.57
NUP50-218ENST00000493456 BHMTQ93088 406 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 SIPA1Q96FS4 1042 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 USP28Q96RU2 1077 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 SDCBP2Q9H190 292 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 PCED1AQ9H1Q7 454 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 IL21RQ9HBE5 538 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 PNPLA8Q9NP80 782 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 TOR4AQ9NXH8 423 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 PLK2Q9NYY3 685 aa18.61■□□□□ 0.57
NUP50-218ENST00000493456 FNDC3AQ9Y2H6 1198 aaKnown RBP18.61■□□□□ 0.57
NUP50-218ENST00000493456 EIF4E1BA6NMX2 242 aaKnown RBP18.6■□□□□ 0.57
NUP50-218ENST00000493456 METTL12A8MUP2 240 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 KCNJ18B7U540 433 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 EXOC3O60645 756 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 PENKP01210 267 aaPredicted RBP18.6■□□□□ 0.57
NUP50-218ENST00000493456 ACADMP11310 421 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 RARGP13631 454 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 ACO1P21399 889 aaKnown RBP18.6■□□□□ 0.57
NUP50-218ENST00000493456 IL12RB1P42701 662 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 CASP4P49662 377 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 MFAP3P55082 362 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 CLDN10P78369 228 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 CUL4AQ13619 759 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 HLA-BQ31612 363 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 TMPRSS6Q8IU80 811 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 NUP58Q9BVL2 599 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 UPF2Q9HAU5 1272 aaKnown RBP18.6■□□□□ 0.57
NUP50-218ENST00000493456 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.6■□□□□ 0.57
NUP50-218ENST00000493456 OSER1Q9NX31 292 aa18.6■□□□□ 0.57
NUP50-218ENST00000493456 CHKAP35790 457 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 PSEN1P49768 467 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 NDST1P52848 882 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 BNC1Q01954 994 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 EHHADHQ08426 723 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 SUZ12Q15022 739 aaKnown RBP18.59■□□□□ 0.57
NUP50-218ENST00000493456 EIF4HQ15056 248 aaKnown RBP18.59■□□□□ 0.57
NUP50-218ENST00000493456 C10orf120Q5SQS8 335 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 FYB2Q5VWT5 728 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 CLEC20AQ6ZU45 233 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 UNC13DQ70J99 1090 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 GPRIN1Q7Z2K8 1008 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 ANKS1BQ7Z6G8 1248 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 ZNF276Q8N554 614 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 IQUBQ8NA54 791 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 GOLGA5Q8TBA6 731 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 RHBDD1Q8TEB9 315 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 PARD3BQ8TEW8 1205 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 LRIG1Q96JA1 1093 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 CDK5RAP1Q96SZ6 601 aaKnown RBP18.59■□□□□ 0.57
NUP50-218ENST00000493456 C7orf25Q9BPX7 421 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 MAGEF1Q9HAY2 307 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 FAM49BQ9NUQ9 324 aa18.59■□□□□ 0.57
NUP50-218ENST00000493456 TFIP11Q9UBB9 837 aaKnown RBP18.59■□□□□ 0.57
NUP50-218ENST00000493456 ASH1LQ9NR48 2969 aaKnown RBP18.58■□□□□ 0.57
NUP50-218ENST00000493456 A0A1W2PQH9 124 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 LRRIQ3A6PVS8 624 aaPredicted RBP18.58■□□□□ 0.56
NUP50-218ENST00000493456 STX6O43752 255 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 STC2O76061 302 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 C4BPAP04003 597 aaKnown RBP18.58■□□□□ 0.56
NUP50-218ENST00000493456 NASPP49321 788 aaPredicted RBP18.58■□□□□ 0.56
NUP50-218ENST00000493456 AFF3P51826 1226 aaKnown RBP18.58■□□□□ 0.56
NUP50-218ENST00000493456 GEN1Q17RS7 908 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 SGSM1Q2NKQ1 1148 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 C1orf216Q8TAB5 229 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 PLEKHO2Q8TD55 490 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 TAF4BQ92750 862 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 DHX58Q96C10 678 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 BBC3Q96PG8 261 aaPredicted RBP18.58■□□□□ 0.56
NUP50-218ENST00000493456 NMUR1Q9HB89 426 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 HMGXB4Q9UGU5 601 aa18.58■□□□□ 0.56
NUP50-218ENST00000493456 EIF2B4Q9UI10 523 aaKnown RBP18.58■□□□□ 0.56
NUP50-218ENST00000493456 HELZ2Q9BYK8 2649 aaKnown RBP18.57■□□□□ 0.56
NUP50-218ENST00000493456 HHLA1C9JL84 531 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 MDM4O15151 490 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 VNN1O95497 513 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 RPN1P04843 607 aaKnown RBP18.57■□□□□ 0.56
NUP50-218ENST00000493456 ATXN1LP0C7T5 689 aaKnown RBP18.57■□□□□ 0.56
NUP50-218ENST00000493456 SYT1P21579 422 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 ADORA2BP29275 332 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 COPAP53621 1224 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 ORC1Q13415 861 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 ZNF234Q14588 700 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 KNOP1Q1ED39 458 aaKnown RBP18.57■□□□□ 0.56
NUP50-218ENST00000493456 SCUBE3Q8IX30 993 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 C12orf29Q8N999 325 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 ENGASEQ8NFI3 743 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 P2RY11Q96G91 374 aa18.57■□□□□ 0.56
NUP50-218ENST00000493456 HNRNPABQ99729 332 aaKnown RBP18.57■□□□□ 0.56
NUP50-218ENST00000493456 DCLK3Q9C098 648 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms