RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 OGDHQ02218 1023 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 SMAD2Q15796 467 aaKnown RBP16.43■□□□□ 0.22
HPS4-216ENST00000493455 PUS10Q3MIT2 529 aaKnown RBP16.43■□□□□ 0.22
HPS4-216ENST00000493455 RAB6CQ53S08 254 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 PPP1R15BQ5SWA1 713 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 TXLNBQ8N3L3 684 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 RFFLQ8WZ73 363 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 KXD1Q9BQD3 176 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 DDX23Q9BUQ8 820 aaKnown RBP16.43■□□□□ 0.22
HPS4-216ENST00000493455 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
HPS4-216ENST00000493455 LACRTQ9GZZ8 138 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 RAB6CQ9H0N0 254 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 GDE1Q9NZC3 331 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 CFAP97Q9P2B7 532 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 TRIM10Q9UDY6 481 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 INTUQ9ULD6 942 aa16.43■□□□□ 0.22
HPS4-216ENST00000493455 MACROD2A1Z1Q3 448 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 TMEM191CA6NGB0 347 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 MOCS2O96007 188 aaPredicted RBP16.42■□□□□ 0.22
HPS4-216ENST00000493455 LAMP2P13473 410 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 GBP1P32455 592 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 ATXN1P54253 815 aaKnown RBP16.42■□□□□ 0.22
HPS4-216ENST00000493455 TBX4P57082 545 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 DEUP1Q05D60 604 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 MESDQ14696 234 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 AAK1Q2M2I8 961 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 CCDC14Q49A88 953 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 SH3PXD2AQ5TCZ1 1133 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 MSANTD2Q6P1R3 559 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 RHOT2Q8IXI1 618 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 SH3RF2Q8TEC5 729 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 FAM172AQ8WUF8 416 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 SMARCD2Q92925 531 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 USP13Q92995 863 aaPredicted RBP16.42■□□□□ 0.22
HPS4-216ENST00000493455 SERPINB11Q96P15 392 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 SMOC2Q9H3U7 446 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 LZTFL1Q9NQ48 299 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 TDP1Q9NUW8 608 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 UVRAGQ9P2Y5 699 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 PYCARDQ9ULZ3 195 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 PPP2R2CQ9Y2T4 447 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 SH3BP1Q9Y3L3 701 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 NR2E1Q9Y466 385 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 DUSP10Q9Y6W6 482 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 EYSQ5T1H1 3165 aa16.42■□□□□ 0.22
HPS4-216ENST00000493455 LEFTY2O00292 366 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 IRAK2O43187 625 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 OLFM2O95897 454 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 GJC1P36383 396 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 ZNF143P52747 638 aaPredicted RBP16.41■□□□□ 0.22
HPS4-216ENST00000493455 SLC7A9P82251 487 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 SLC25A52Q3SY17 297 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 OTUD1Q5VV17 481 aaPredicted RBP16.41■□□□□ 0.22
HPS4-216ENST00000493455 DAB2IPQ5VWQ8 1189 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 SCYL2Q6P3W7 929 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 SND1Q7KZF4 910 aaKnown RBP eCLIP16.41■□□□□ 0.22
HPS4-216ENST00000493455 WBP2Q969T9 261 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
HPS4-216ENST00000493455 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 NPY6RQ99463 290 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 KLF16Q9BXK1 252 aaPredicted RBP16.41■□□□□ 0.22
HPS4-216ENST00000493455 ADAM33Q9BZ11 813 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 TRMT1Q9NXH9 659 aaKnown RBP16.41■□□□□ 0.22
HPS4-216ENST00000493455 ZMYM5Q9UJ78 669 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 GUCA1BQ9UMX6 200 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 PAXBP1Q9Y5B6 917 aa16.41■□□□□ 0.22
HPS4-216ENST00000493455 MYO1FO00160 1098 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 PFKLP17858 780 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 COG7P83436 770 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 ZNF252P-AS1Q0IIN9 211 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 GRM2Q14416 872 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 TRIP4Q15650 581 aaPredicted RBP16.4■□□□□ 0.22
HPS4-216ENST00000493455 ARHGAP29Q52LW3 1261 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 ZC3H12AQ5D1E8 599 aaKnown RBP16.4■□□□□ 0.22
HPS4-216ENST00000493455 TANGO2Q6ICL3 276 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 KLHDC10Q6PID8 442 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 PARM1Q6UWI2 310 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 BEND5Q7L4P6 421 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 FAM131BQ86XD5 332 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 RSAD2Q8WXG1 361 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 CNPY3Q9BT09 278 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 ZFP14Q9HCL3 533 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 PIGVQ9NUD9 493 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 RRN3Q9NYV6 651 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 CALCOCO1Q9P1Z2 691 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 IP6K2Q9UHH9 426 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 LSM7Q9UK45 103 aaKnown RBP16.4■□□□□ 0.22
HPS4-216ENST00000493455 ARHGAP26Q9UNA1 814 aa16.4■□□□□ 0.22
HPS4-216ENST00000493455 HEPACAM2A8MVW5 462 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 PJA2O43164 708 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 RNF8O76064 485 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 MOCS3O95396 460 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 APOEP02649 317 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 TNNT1P13805 278 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 CORO1AP31146 461 aaKnown RBP16.39■□□□□ 0.21
HPS4-216ENST00000493455 RDXP35241 583 aaKnown RBP16.39■□□□□ 0.21
HPS4-216ENST00000493455 PTPN9P43378 593 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 ZXDBP98169 803 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 ARCQ7LC44 396 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms