RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 RSRC2Q7L4I2 434 aaKnown RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 CPXM2Q8N436 756 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 MLKLQ8NB16 471 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 NETO1Q8TDF5 533 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 IRGQQ8WZA9 623 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 PLD4Q96BZ4 506 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 HSFY1Q96LI6 401 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 FAM81BQ96LP2 452 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 IPO9Q96P70 1041 aaKnown RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ARRDC1-AS1Q9H2J1 176 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ABCC13Q9NSE7 274 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 SLC27A6Q9Y2P4 619 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 HBS1LQ9Y450 684 aaKnown RBP12.04□□□□□ -0.48
LRTM1-202ENST00000493075 FRYLO94915 3013 aa12.04□□□□□ -0.48
LRTM1-202ENST00000493075 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 SLC12A8A0AV02 714 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 GFRA2O00451 464 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 TRIM24O15164 1050 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 HNRNPLP14866 589 aaKnown RBP eCLIP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 NTSR1P30989 418 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 CORO1AP31146 461 aaKnown RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 RPL34P49207 117 aaKnown RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 DGKGP49619 791 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 DAOAP59103 153 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 ADIGQ0VDE8 80 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 BYSLQ13895 437 aaKnown RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 MEA1Q16626 185 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 SDE2Q6IQ49 451 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 PMF1Q6P1K2 205 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 RRAGAQ7L523 313 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 ENOSF1Q7L5Y1 443 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 ARHGEF19Q8IW93 802 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 FAM217AQ8IXS0 508 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 SIX6OS1Q8N1H7 587 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 ZNF513Q8N8E2 541 aaPredicted RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 RBBP8NLQ8NC74 664 aaPredicted RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 MDGA1Q8NFP4 955 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 RNF139Q8WU17 664 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 NDRG1Q92597 394 aaKnown RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 KAT5Q92993 513 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 ZSWIM1Q9BR11 485 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 INTS2Q9H0H0 1204 aaKnown RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 VPS45Q9NRW7 570 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 STOML2Q9UJZ1 356 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
LRTM1-202ENST00000493075 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.03□□□□□ -0.48
LRTM1-202ENST00000493075 YJEFN3A6XGL0 299 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 PRRT4C9JH25 899 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 E7ENQ6 273 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 SLC30A4O14863 429 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 DCLK1O15075 740 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 NPC1O15118 1278 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 GABBR2O75899 941 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 FBXO21O94952 628 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 LATS1O95835 1130 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 CYBBP04839 570 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 HMBSP08397 361 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 P2RY2P41231 377 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 HARS2P49590 506 aaKnown RBP12.02□□□□□ -0.49
LRTM1-202ENST00000493075 LIMK1P53667 647 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 ZNF445P59923 1031 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 E2F5Q15329 346 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 SPDYCQ5MJ68 293 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 FYB2Q5VWT5 728 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 PMS2CLQ68D20 193 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 DENND1CQ8IV53 801 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 FMNL3Q8IVF7 1028 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 KREMEN1Q96MU8 473 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 MED15Q96RN5 788 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 SLC2A11Q9BYW1 496 aa12.02□□□□□ -0.49
LRTM1-202ENST00000493075 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
LRTM1-202ENST00000493075 UBE2TQ9NPD8 197 aaPredicted RBP12.02□□□□□ -0.49
LRTM1-202ENST00000493075 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
LRTM1-202ENST00000493075 WDR87Q6ZQQ6 2873 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.01□□□□□ -0.49
LRTM1-202ENST00000493075 A0A1W2PQF6 199 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 BCLAF3A2AJT9 711 aaKnown RBP12.01□□□□□ -0.49
LRTM1-202ENST00000493075 GTPBP10A4D1E9 387 aaKnown RBP12.01□□□□□ -0.49
LRTM1-202ENST00000493075 ZBTB24O43167 697 aaPredicted RBP12.01□□□□□ -0.49
LRTM1-202ENST00000493075 LCP1P13796 627 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 BRD2P25440 801 aaKnown RBP12.01□□□□□ -0.49
LRTM1-202ENST00000493075 MPLP40238 635 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 GPD2P43304 727 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 MFAP3P55082 362 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 MSANTD2Q6P1R3 559 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 CLEC17AQ6ZS10 378 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 TOGARAM2Q6ZUX3 1019 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 IRF2BP1Q8IU81 584 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 C12orf50Q8NA57 414 aaPredicted RBP12.01□□□□□ -0.49
LRTM1-202ENST00000493075 STK32AQ8WU08 396 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 AZIN2Q96A70 460 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 GABRG3Q99928 467 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 CLSTN2Q9H4D0 955 aa12.01□□□□□ -0.49
LRTM1-202ENST00000493075 TCRBV21S2A2A0A5A6 115 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 M0QYV0 167 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 SART1O43290 800 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms