RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CISD3P0C7P0 127 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 BCKDHBP21953 392 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 HARS2P49590 506 aaKnown RBP13.06□□□□□ -0.32
COL6A1-205ENST00000492851 BST2Q10589 180 aaKnown RBP13.06□□□□□ -0.32
COL6A1-205ENST00000492851 EFEMP1Q12805 493 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 STARD3Q14849 445 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 STILQ15468 1287 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 CBWD6Q4V339 395 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 CBWD3Q5JTY5 395 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 CBWD5Q5RIA9 395 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 LYSMD4Q5XG99 296 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 CPXM2Q8N436 756 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
COL6A1-205ENST00000492851 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 KCTD13Q8WZ19 329 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 SLC35C1Q96A29 364 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
COL6A1-205ENST00000492851 SMOC1Q9H4F8 434 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 NUDT5Q9UKK9 219 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 TSPAN16Q9UKR8 245 aa13.06□□□□□ -0.32
COL6A1-205ENST00000492851 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 A0A1W2PQF6 199 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 LNP1A1A4G5 178 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 BICDL2A1A5D9 508 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 MDM4O15151 490 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 KCNK5O95279 499 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 GNA14O95837 355 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 PENKP01210 267 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 SETSIPP0DME0 302 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 CD19P15391 556 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 GABRG2P18507 467 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 KCNA4P22459 653 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 CORO1AP31146 461 aaKnown RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 RPL6Q02878 288 aaKnown RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 EIF4HQ15056 248 aaKnown RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 TRIM61Q5EBN2 209 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 TCEAL6Q6IPX3 200 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 SLC23A3Q6PIS1 610 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 METTL3Q86U44 580 aaKnown RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 TMEFF1Q8IYR6 380 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 SIX6OS1Q8N1H7 587 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 SCML4Q8N228 414 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 TCEAL3Q969E4 200 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 CNTNAP3BQ96NU0 1288 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 ARID3AQ99856 593 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 CNTNAP3Q9BZ76 1288 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 IRX2Q9BZI1 471 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 CNGB3Q9NQW8 809 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 ABCC13Q9NSE7 274 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 ANGPTL2Q9UKU9 493 aa13.05□□□□□ -0.32
COL6A1-205ENST00000492851 AGO1Q9UL18 857 aaKnown RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 HBS1LQ9Y450 684 aaKnown RBP13.05□□□□□ -0.32
COL6A1-205ENST00000492851 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 PRRT4C9JH25 899 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 TRIM24O15164 1050 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 FGFR1OPO95684 399 aaKnown RBP13.04□□□□□ -0.32
COL6A1-205ENST00000492851 LATS1O95835 1130 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 KLKB1P03952 638 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 CEACAM1P13688 526 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 CSRP1P21291 193 aaKnown RBP13.04□□□□□ -0.32
COL6A1-205ENST00000492851 FMO5P49326 533 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 IRX4P78413 519 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 PDE4CQ08493 712 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-205ENST00000492851 DUOXA1Q1HG43 343 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 CCDC40Q4G0X9 1142 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 MPPE1Q53F39 396 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 N4BP2L1Q5TBK1 243 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-205ENST00000492851 FYB2Q5VWT5 728 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-205ENST00000492851 EGFLAMQ63HQ2 1017 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 DENND1CQ8IV53 801 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 ZNF557Q8N988 423 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-205ENST00000492851 DDI1Q8WTU0 396 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 FOXJ1Q92949 421 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 NT5C1BQ96P26 610 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 ULBP1Q9BZM6 244 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 ZDHHC4Q9NPG8 344 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 MBD1Q9UIS9 605 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-205ENST00000492851 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 SLC6A14Q9UN76 642 aa13.04□□□□□ -0.32
COL6A1-205ENST00000492851 SYNCRIPO60506 623 aaKnown RBP13.03□□□□□ -0.32
COL6A1-205ENST00000492851 NDUFS2O75306 463 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 HMBSP08397 361 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 WASP42768 502 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 PTGER3P43115 390 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-205ENST00000492851 PMS1P54277 932 aaKnown RBP13.03□□□□□ -0.32
COL6A1-205ENST00000492851 MFAP3P55082 362 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 SHC2P98077 582 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 ARID5AQ03989 594 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 GFPT1Q06210 699 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-205ENST00000492851 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms