RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TANGO2Q6ICL3 276 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 GRHL2Q6ISB3 625 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 TECPR1Q7Z6L1 1165 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 CERS3Q8IU89 383 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 C11orf44Q8N8P7 122 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 KATNAL1Q9BW62 490 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 TMEM120AQ9BXJ8 343 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 MLXIPQ9HAP2 919 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 SERTAD4Q9NUC0 356 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 DLL3Q9NYJ7 618 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 ASAP1Q9ULH1 1129 aa3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 MORC2Q9Y6X9 1032 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 SETD1BQ9UPS6 1966 aaKnown RBP3.4□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRR23D1E9PI22 279 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 H0YIZ8 118 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 J3KTA2 159 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 M0QZQ0 153 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 IPO5O00410 1097 aaKnown RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZNF213O14771 459 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 PMPCBO75439 489 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 TAF5LO75529 589 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 NTN1O95631 604 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 GLP2RO95838 553 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 ANXA6P08133 673 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRR23D2P0DMB1 279 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 GYS1P13807 737 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 KLRK1P26718 216 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRKAR1BP31321 381 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 GKP32189 559 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 PBX1P40424 430 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 GRIA3P42263 894 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 SSBP2P81877 361 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 PSG6Q00889 435 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 E2F1Q01094 437 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 DEUP1Q05D60 604 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 BMPR2Q13873 1038 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 KLF9Q13886 244 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 GRM4Q14833 912 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 TRIM71Q2Q1W2 868 aaKnown RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 AASDHQ4L235 1098 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 TEDDM1Q5T9Z0 273 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 MORN5Q5VZ52 161 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 KAZNQ674X7 775 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 MSANTD2Q6P1R3 559 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 CLEC9AQ6UXN8 241 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 LDHAL6AQ6ZMR3 332 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 Q6ZWC4 215 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 SMRP1Q8NCR6 262 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 MCRS1Q96EZ8 462 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 LENG8Q96PV6 779 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRPF18Q99633 342 aaKnown RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 HERPUD2Q9BSE4 406 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 THAP7Q9BT49 309 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 SORBS1Q9BX66 1292 aaKnown RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 SEMA4CQ9C0C4 833 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 TP63Q9H3D4 680 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 MYH16Q9H6N6 1097 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 EPS8L2Q9H6S3 715 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 TRIM36Q9NQ86 728 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 DUSP22Q9NRW4 184 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 DACT1Q9NYF0 836 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZNF112Q9UJU3 913 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 CA14Q9ULX7 337 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 GPR52Q9Y2T5 361 aa3.39□□□□□ -1.87
HMGB1P30-201ENST00000492455 GXYLT2A0PJZ3 443 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM90A18PA6NE21 464 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM90A16PA6NEW6 464 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM90A9PA6NNJ1 464 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 A8MVJ9 347 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM90A5PA8MXJ8 464 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 DNPH1O43598 174 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 MOSPD3O75425 235 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 URI1O94763 535 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 USP1O94782 785 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 NXPH3O95157 252 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 VIPP01282 170 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM90A15PP0C7V4 464 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM90A14PP0C7W9 464 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 IDEP14735 1019 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 POSTNQ15063 836 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 TMEM95Q3KNT9 176 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM153CQ494X1 144 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 TRIM60Q495X7 471 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM90A2PQ658T7 463 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 PIK3AP1Q6ZUJ8 805 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 AMIGO2Q86SJ2 522 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 ANKRD42Q8N9B4 389 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 SCAMP5Q8TAC9 235 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 ABHD5Q8WTS1 349 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 XAGE5Q8WWM1 108 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRR11Q96HE9 360 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 FSD1LQ9BXM9 530 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 ARHGEF3Q9NR81 526 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 TMOD4Q9NZQ9 345 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 LUZP4Q9P127 313 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 LRFN1Q9P244 771 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 SRP68Q9UHB9 627 aaKnown RBP3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 USP22Q9UPT9 525 aa3.38□□□□□ -1.87
HMGB1P30-201ENST00000492455 LINC01548A6NM66 108 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms