RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ZNF839A8K0R7 811 aa10□□□□□ -0.81
VPS8-225ENST00000492449 COPEO14579 308 aa10□□□□□ -0.81
VPS8-225ENST00000492449 SPAG6O75602 509 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CLPXO76031 633 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CRYZL1O95825 349 aa10□□□□□ -0.81
VPS8-225ENST00000492449 LDHCP07864 332 aa10□□□□□ -0.81
VPS8-225ENST00000492449 RHBDL3P58872 404 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CACNB1Q02641 598 aaPredicted RBP10□□□□□ -0.81
VPS8-225ENST00000492449 CBLBQ13191 982 aa10□□□□□ -0.81
VPS8-225ENST00000492449 PTK7Q13308 1070 aa10□□□□□ -0.81
VPS8-225ENST00000492449 IKBKEQ14164 716 aa10□□□□□ -0.81
VPS8-225ENST00000492449 LMOD2Q6P5Q4 547 aa10□□□□□ -0.81
VPS8-225ENST00000492449 C4orf22Q6V702 233 aa10□□□□□ -0.81
VPS8-225ENST00000492449 ATL1Q8WXF7 558 aa10□□□□□ -0.81
VPS8-225ENST00000492449 JDP2Q8WYK2 163 aa10□□□□□ -0.81
VPS8-225ENST00000492449 RAPGEF4Q8WZA2 1011 aa10□□□□□ -0.81
VPS8-225ENST00000492449 ZNF486Q96H40 463 aaPredicted RBP10□□□□□ -0.81
VPS8-225ENST00000492449 FAR2Q96K12 515 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CYP4F11Q9HBI6 524 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CNGB3Q9NQW8 809 aa10□□□□□ -0.81
VPS8-225ENST00000492449 SUCOQ9UBS9 1254 aaKnown RBP10□□□□□ -0.81
VPS8-225ENST00000492449 CHORDC1Q9UHD1 332 aaPredicted RBP10□□□□□ -0.81
VPS8-225ENST00000492449 IPO11Q9UI26 975 aaKnown RBP10□□□□□ -0.81
VPS8-225ENST00000492449 TRAF6Q9Y4K3 522 aa10□□□□□ -0.81
VPS8-225ENST00000492449 PCDHB13Q9Y5F0 798 aa10□□□□□ -0.81
VPS8-225ENST00000492449 NHSQ6T4R5 1651 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CDK5RAP2Q96SN8 1893 aa10□□□□□ -0.81
VPS8-225ENST00000492449 NUAK1O60285 661 aa10□□□□□ -0.81
VPS8-225ENST00000492449 KRT6AP02538 564 aa10□□□□□ -0.81
VPS8-225ENST00000492449 KRT6BP04259 564 aa10□□□□□ -0.81
VPS8-225ENST00000492449 MCF2P10911 925 aa10□□□□□ -0.81
VPS8-225ENST00000492449 M6PRP20645 277 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CXCR2P25025 360 aa10□□□□□ -0.81
VPS8-225ENST00000492449 EPHA3P29320 983 aa10□□□□□ -0.81
VPS8-225ENST00000492449 ADSLP30566 484 aaPredicted RBP10□□□□□ -0.81
VPS8-225ENST00000492449 SSTR1P30872 391 aa10□□□□□ -0.81
VPS8-225ENST00000492449 ARSEP51690 589 aa10□□□□□ -0.81
VPS8-225ENST00000492449 TMBIM6P55061 237 aa10□□□□□ -0.81
VPS8-225ENST00000492449 MRPS22P82650 360 aaKnown RBP10□□□□□ -0.81
VPS8-225ENST00000492449 TRPC3Q13507 836 aa10□□□□□ -0.81
VPS8-225ENST00000492449 PTK2BQ14289 1009 aa10□□□□□ -0.81
VPS8-225ENST00000492449 ZNF846Q147U1 533 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CHI3L2Q15782 390 aa10□□□□□ -0.81
VPS8-225ENST00000492449 KRT80Q6KB66 452 aa10□□□□□ -0.81
VPS8-225ENST00000492449 TMCO5AQ8N6Q1 288 aa10□□□□□ -0.81
VPS8-225ENST00000492449 CHAC2Q8WUX2 184 aa10□□□□□ -0.81
VPS8-225ENST00000492449 RMDN3Q96TC7 470 aa10□□□□□ -0.81
VPS8-225ENST00000492449 WDR83Q9BRX9 315 aaKnown RBP10□□□□□ -0.81
VPS8-225ENST00000492449 C20orf27Q9GZN8 174 aa10□□□□□ -0.81
VPS8-225ENST00000492449 SMARCAD1Q9H4L7 1026 aa10□□□□□ -0.81
VPS8-225ENST00000492449 PCDH9Q9HC56 1237 aa10□□□□□ -0.81
VPS8-225ENST00000492449 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
VPS8-225ENST00000492449 PARVAQ9NVD7 372 aa10□□□□□ -0.81
VPS8-225ENST00000492449 DMAC2Q9NW81 257 aa10□□□□□ -0.81
VPS8-225ENST00000492449 ATP11BQ9Y2G3 1177 aa10□□□□□ -0.81
VPS8-225ENST00000492449 SNCAIPQ9Y6H5 919 aa10□□□□□ -0.81
VPS8-225ENST00000492449 FAM172BPA6NC97 362 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 ACOX3O15254 700 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 FKBP9O95302 570 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 SERPINB2P05120 415 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 PRKACBP22694 351 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 BMPR1AP36894 532 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 FMO1Q01740 532 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 GPS1Q13098 491 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 GRIK5Q16478 980 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 SHROOM1Q2M3G4 852 aaPredicted RBP9.99□□□□□ -0.81
VPS8-225ENST00000492449 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
VPS8-225ENST00000492449 FAM117BQ6P1L5 589 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 CCDC81Q6ZN84 652 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 CDHR3Q6ZTQ4 885 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 TPH2Q8IWU9 490 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 FAM71AQ8IYT1 594 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 GLIS1Q8NBF1 620 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 TXNDC15Q96J42 360 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 TMEM79Q9BSE2 394 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 NANOGQ9H9S0 305 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 FKBP14Q9NWM8 211 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 KLHL41O60662 606 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 BCAS2O75934 225 aaPredicted RBP9.99□□□□□ -0.81
VPS8-225ENST00000492449 ALX3O95076 343 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 KRT18P05783 430 aaKnown RBP9.99□□□□□ -0.81
VPS8-225ENST00000492449 COX4I1P13073 169 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 YBX3P16989 372 aaKnown RBP eCLIP9.99□□□□□ -0.81
VPS8-225ENST00000492449 MAPK4P31152 587 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 THOP1P52888 689 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 DYNLL1P63167 89 aaKnown RBP9.99□□□□□ -0.81
VPS8-225ENST00000492449 FLOT2Q14254 428 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 LLGL1Q15334 1064 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 BOLA3Q53S33 107 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 PIGGQ5H8A4 983 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 FAM47CQ5HY64 1035 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 C16orf46Q6P387 395 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 NUDCD3Q8IVD9 361 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 EXD1Q8NHP7 514 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 PIWIL2Q8TC59 973 aaKnown RBP9.99□□□□□ -0.81
VPS8-225ENST00000492449 TP53INP1Q96A56 240 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 CEP295NLQ96MC4 621 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 NACC1Q96RE7 527 aa9.99□□□□□ -0.81
VPS8-225ENST00000492449 MARCH7Q9H992 704 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms