RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 KLHL5Q96PQ7 755 aa10.86□□□□□ -0.67
EPHB4-208ENST00000492403 FIZ1Q96SL8 496 aa10.86□□□□□ -0.67
EPHB4-208ENST00000492403 SELENOOQ9BVL4 669 aa10.86□□□□□ -0.67
EPHB4-208ENST00000492403 INTS2Q9H0H0 1204 aaKnown RBP10.86□□□□□ -0.67
EPHB4-208ENST00000492403 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.86□□□□□ -0.67
EPHB4-208ENST00000492403 SFMBT1Q9UHJ3 866 aa10.86□□□□□ -0.67
EPHB4-208ENST00000492403 FBXL21Q9UKT6 434 aa10.86□□□□□ -0.67
EPHB4-208ENST00000492403 REXO2Q9Y3B8 237 aaKnown RBP10.86□□□□□ -0.67
EPHB4-208ENST00000492403 MYO7AQ13402 2215 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 BDP1A6H8Y1 2624 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 TARSL2A2RTX5 802 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 CCDC151A5D8V7 595 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 C2CD4DB7Z1M9 353 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 CES2O00748 559 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 BMP4P12644 408 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 ARF4P18085 180 aaPredicted RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 TNFAIP3P21580 790 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 HOXA11P31270 313 aaPredicted RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 NAMPTP43490 491 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 CASP4P49662 377 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 LIG4P49917 911 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 SCNN1GP51170 649 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 NEK2P51955 445 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 BPIFB4P59827 614 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 NHLH1Q02575 133 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 GRIK3Q13003 919 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 PRPF4BQ13523 1007 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 KCNC3Q14003 757 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 SURF1Q15526 300 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 USP41Q3LFD5 358 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 GLE1Q53GS7 698 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 ALKBH5Q6P6C2 394 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 FOXR1Q6PIV2 292 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 RSRC2Q7L4I2 434 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 C12orf40Q86WS4 652 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 TMEM173Q86WV6 379 aaPredicted RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 DAW1Q8N136 415 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 AHI1Q8N157 1196 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 TMEM161BQ8NDZ6 487 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 POMGNT1Q8WZA1 660 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 SLC6A18Q96N87 628 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 SMAD5Q99717 465 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 HERC2P3Q9BVR0 1158 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 NFKBIZQ9BYH8 718 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 DNAJC12Q9UKB3 198 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 HES2Q9Y543 173 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 TDRD15B5MCY1 1934 aaKnown RBP10.85□□□□□ -0.67
EPHB4-208ENST00000492403 BRWD1Q9NSI6 2320 aa10.85□□□□□ -0.67
EPHB4-208ENST00000492403 CCDC195A0A1B0GUA6 201 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 K7ERI5 159 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 HNRNPDLO14979 420 aaKnown RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 AXIN1O15169 862 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 TP53P04637 393 aaPredicted RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 CNPP09543 421 aaKnown RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 H2AFXP16104 143 aaPredicted RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 SLC9A1P19634 815 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 GLRA2P23416 452 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 AKAP5P24588 427 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 ARL2P36404 184 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 MXI1P50539 228 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 CLCN4P51793 760 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 YARSP54577 528 aaKnown RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 JAM2P57087 298 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 MBTD1Q05BQ5 628 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 GFPT1Q06210 699 aaPredicted RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 SNRNP35Q16560 246 aaKnown RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 UBXN11Q5T124 520 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 TDRD10Q5VZ19 366 aaKnown RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 KRT39Q6A163 491 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 PSAPL1Q6NUJ1 521 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 C15orf39Q6ZRI6 1047 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 IRF2BP2Q7Z5L9 587 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 GPR149Q86SP6 731 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 CEP57Q86XR8 500 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 PALB2Q86YC2 1186 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 PHACTR4Q8IZ21 702 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 ZDHHC14Q8IZN3 488 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 GPD1LQ8N335 351 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 SMG8Q8ND04 991 aaKnown RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 CTNNBL1Q8WYA6 563 aaPredicted RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 ATOH1Q92858 354 aaPredicted RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 PBKQ96KB5 322 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 FNBP1Q96RU3 617 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 NAP1L3Q99457 506 aaPredicted RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 NXF3Q9H4D5 531 aaKnown RBP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 TMEM8AQ9HCN3 771 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 XPNPEP1Q9NQW7 623 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 MAN1C1Q9NR34 630 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 ADAM28Q9UKQ2 775 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 SNX12Q9UMY4 172 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 ZMYM2Q9UBW7 1377 aa10.84□□□□□ -0.67
EPHB4-208ENST00000492403 SF3B1O75533 1304 aaKnown RBP eCLIP10.84□□□□□ -0.67
EPHB4-208ENST00000492403 NCOR1O75376 2440 aa10.83□□□□□ -0.68
EPHB4-208ENST00000492403 GRID2IPA4D2P6 1211 aa10.83□□□□□ -0.68
EPHB4-208ENST00000492403 EPHB6O15197 1021 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms