RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 NBASA2RRP1 2371 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 E2F8A0AVK6 867 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 FRMD3A2A2Y4 597 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 MEI4A8MW99 385 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 ENC1O14682 589 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 KLK10O43240 276 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 PRPF6O94906 941 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 MBL2P11226 248 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 NDUFV2P19404 249 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 NFKB2Q00653 900 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 TDRD10Q5VZ19 366 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 SV2BQ7L1I2 683 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 DDX42Q86XP3 938 aaKnown RBP eCLIP12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 LSMEM2Q8N112 164 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 GPD1LQ8N335 351 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 NAT16Q8N8M0 369 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 C1orf216Q8TAB5 229 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 SEMA3CQ99985 751 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 CD248Q9HCU0 757 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 TBC1D14Q9P2M4 693 aa12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 TP53BP1Q12888 1972 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-228ENST00000492150 LRBAP50851 2863 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 A0A1W2PQF6 199 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 TBC1D3BA6NDS4 549 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 TRIM24O15164 1050 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 TULP3O75386 442 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 TNNC2P02585 160 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 SFTPCP11686 197 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 PTPN1P18031 435 aaKnown RBP12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 GNL1P36915 607 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 ACADVLP49748 655 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 GAD2Q05329 585 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 ILKQ13418 452 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 ALCAMQ13740 583 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 DUOXA2Q1HG44 320 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 BRAPQ7Z569 592 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 MIB1Q86YT6 1006 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 CBWD2Q8IUF1 395 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 DCBLD1Q8N8Z6 715 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 IGSF8Q969P0 613 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 WBP2Q969T9 261 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 OTUB2Q96DC9 234 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 MMS19Q96T76 1030 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 ZNF518BQ9C0D4 1074 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 DPEP3Q9H4B8 488 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 LRRC4CQ9HCJ2 640 aa12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
CACNA1C-228ENST00000492150 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CLDN5O00501 218 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 HOXC11O43248 304 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 COCHO43405 550 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 TACC1O75410 805 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CST3P01034 146 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 HOXB2P14652 356 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 IDEP14735 1019 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CD6P30203 668 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 WASP42768 502 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 RABEP1Q15276 862 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 SURF1Q15526 300 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 RRAGBQ5VZM2 374 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 HS2ST1Q7LGA3 356 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 METTL3Q86U44 580 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 TMEM25Q86YD3 366 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CLIC6Q96NY7 704 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 SLITRK1Q96PX8 696 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 B3GNT5Q9BYG0 378 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 MIR1-1HGQ9H1L0 117 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 SNX25Q9H3E2 840 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 SPHK2Q9NRA0 654 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 DEC1Q9P2X7 70 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CHORDC1Q9UHD1 332 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CLCA2Q9UQC9 943 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 CLIC4Q9Y696 253 aa12.39□□□□□ -0.43
CACNA1C-228ENST00000492150 A0A1B0GVT2 93 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 KIAA0391O15091 583 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 FAM163BP0C2L3 166 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 NCAM1P13591 858 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 GLDCP23378 1020 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 YWHAQP27348 245 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 NTSR1P30989 418 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 HOXD13P35453 343 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 AFF3P51826 1226 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 KIF19Q2TAC6 998 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 LINC00303Q3SY05 128 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 C10orf76Q5T2E6 689 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 BTBD8Q5XKL5 378 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 HIST2H2BCQ6DN03 193 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 NUP93Q8N1F7 819 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 TERB1Q8NA31 727 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms