RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MDM4O15151 490 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 P4HA2O15460 535 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 KRT37O76014 449 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 ZBED1O96006 694 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 IRF1P10914 325 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 RALAP11233 206 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 PMLP29590 882 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 CHKAP35790 457 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 PPP1R2P41236 205 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 DPP6P42658 865 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 RPL34P49207 117 aaKnown RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 TKTL1P51854 596 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 ZNF132P52740 706 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 CREB5Q02930 508 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 ZNF394Q53GI3 561 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 C10orf76Q5T2E6 689 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 EGFLAMQ63HQ2 1017 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 GRAMD4Q6IC98 578 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 TTI2Q6NXR4 508 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 SLC23A3Q6PIS1 610 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 LCLAT1Q6UWP7 414 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 TOGARAM2Q6ZUX3 1019 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 FRMD1Q8N878 549 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 SLC35F5Q8WV83 523 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 RLN3Q8WXF3 142 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 SMARCE1Q969G3 411 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 CEP63Q96MT8 703 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 ACOX2Q99424 681 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 ZSWIM1Q9BR11 485 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 SLC2A11Q9BYW1 496 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 DCLK3Q9C098 648 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 MMRN2Q9H8L6 949 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 METTL14Q9HCE5 456 aaKnown RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 TMEM74BQ9NUR3 256 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 DNAJC17Q9NVM6 304 aaKnown RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 ARMCX3Q9UH62 379 aaPredicted RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 LSM7Q9UK45 103 aaKnown RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 PILRBQ9UKJ0 227 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 AGO1Q9UL18 857 aaKnown RBP8.79□□□□□ -1
SMARCB1-207ENST00000491967 WASF3Q9UPY6 502 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 CNTN6Q9UQ52 1028 aa8.79□□□□□ -1
SMARCB1-207ENST00000491967 TCRBV21S2A2A0A5A6 115 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 TRIM49BA6NDI0 452 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 UPK3BL1B0FP48 263 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 UPK3BL2E5RIL1 263 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 NEDD8-MDP1E9PL57 170 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 TULP2O00295 520 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 PSMA7O14818 248 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 KHNYNO15037 678 aaKnown RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 KCNK5O95279 499 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 IGLV3-27P01718 113 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 PAEPP09466 180 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 VDRP11473 427 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 CSRP1P21291 193 aaKnown RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 TBXAS1P24557 533 aaPredicted RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 GBP1P32455 592 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 PTGER3P43115 390 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 FMO5P49326 533 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 DGKGP49619 791 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 BCAT1P54687 386 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 MFAP3P55082 362 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 YWHAGP61981 247 aaKnown RBP eCLIP8.78□□□□□ -1
SMARCB1-207ENST00000491967 YWHAEP62258 255 aaKnown RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 IRX4P78413 519 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 PDE4CQ08493 712 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 BST2Q10589 180 aaKnown RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 MORC3Q14149 939 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 CNGA2Q16280 664 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 N4BP2L1Q5TBK1 243 aaPredicted RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 IL31Q6EBC2 164 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 KIAA1211LQ6NV74 962 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 TPGS1Q6ZTW0 290 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 LPCAT2Q7L5N7 544 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 KIAA0907Q7Z7F0 614 aaPredicted RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 SYT12Q8IV01 421 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 IPO4Q8TEX9 1081 aaKnown RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 HMGB4Q8WW32 186 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 TFAP2BQ92481 460 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 ERCC4Q92889 916 aaPredicted RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 JAKMIP2Q96AA8 810 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 ZNF419Q96HQ0 510 aaPredicted RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 MRGPRX1Q96LB2 322 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 CNTNAP3BQ96NU0 1288 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 TSG101Q99816 390 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 CNTNAP3Q9BZ76 1288 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 ZDHHC4Q9NPG8 344 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 MARCH2Q9P0N8 246 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 THAP10Q9P2Z0 257 aaPredicted RBP8.78□□□□□ -1
SMARCB1-207ENST00000491967 MAN1B1Q9UKM7 699 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 TSPAN16Q9UKR8 245 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 CABIN1Q9Y6J0 2220 aa8.78□□□□□ -1
SMARCB1-207ENST00000491967 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 IGHV1OR15-9A0A0B4J2B8 117 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 GOLGA6L4A6NEF3 574 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 C4orf47A7E2U8 309 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 PATE3B3GLJ2 98 aa8.77□□□□□ -1.01
SMARCB1-207ENST00000491967 RNF225M0QZC1 329 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms