RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 BTBD8Q5XKL5 378 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 ANKS3Q6ZW76 656 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 STRADAQ7RTN6 431 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 UBE2Q1Q7Z7E8 422 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 PLD5Q8N7P1 536 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 ATL2Q8NHH9 583 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 DQX1Q8TE96 717 aaKnown RBP14.47□□□□□ -0.09
SMPD4-219ENST00000491128 SIK2Q9H0K1 926 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 GRHL1Q9NZI5 618 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 XPO7Q9UIA9 1087 aaKnown RBP14.47□□□□□ -0.09
SMPD4-219ENST00000491128 FZD10Q9ULW2 581 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 ENDOD1O94919 500 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 SEC24AO95486 1093 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 FGBP02675 491 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 PAX3P23760 479 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 MCM3P25205 808 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 SCNN1AP37088 669 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 ADCY8P40145 1251 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 COPS2P61201 443 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 GPR17Q13304 367 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 ZDHHC24Q6UX98 284 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 BBS12Q6ZW61 710 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 UNC45BQ8IWX7 931 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 VPS52Q8N1B4 723 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 NUP93Q8N1F7 819 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 COLGALT1Q8NBJ5 622 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 TKTL2Q9H0I9 626 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 OR6C75A6NL08 312 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 MOCS2O96007 188 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-219ENST00000491128 ATF6P18850 670 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 SLC10A2Q12908 348 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-219ENST00000491128 PPP2R5EQ16537 467 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 SLC39A11Q8N1S5 342 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 FAM71DQ8N9W8 422 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 MAIP1Q8WWC4 291 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 CSPG4P5Q96PW8 444 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 UBXN6Q9BZV1 441 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 RAB17Q9H0T7 212 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 F5H423 210 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-219ENST00000491128 KRT14P02533 472 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 HMBSP08397 361 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 EIF3EP60228 445 aaKnown RBP14.46□□□□□ -0.09
SMPD4-219ENST00000491128 FPGSQ05932 587 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 ELAVL2Q12926 359 aaKnown RBP14.46□□□□□ -0.09
SMPD4-219ENST00000491128 TAF10Q12962 218 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 TAZQ16635 292 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 RASIP1Q5U651 963 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 DENND5BQ6ZUT9 1274 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 ARCQ7LC44 396 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 HDXQ7Z353 690 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 CCDC25Q86WR0 208 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 MIB1Q86YT6 1006 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 MAP7D3Q8IWC1 876 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 WDCPQ9H6R7 721 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 PRDM10Q9NQV6 1147 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.46□□□□□ -0.09
SMPD4-219ENST00000491128 RASAL2Q9UJF2 1139 aa14.46□□□□□ -0.09
SMPD4-219ENST00000491128 SPTBN5Q9NRC6 3674 aaKnown RBP14.46□□□□□ -0.1
SMPD4-219ENST00000491128 FAM187AA6NFU0 413 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 BHMG1C9JSJ3 638 aaPredicted RBP14.45□□□□□ -0.1
SMPD4-219ENST00000491128 TP73O15350 636 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 SRGAP2BP0DMP2 458 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 RBP3P10745 1247 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 MYOGP15173 224 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 OASLQ15646 514 aaKnown RBP14.45□□□□□ -0.1
SMPD4-219ENST00000491128 MAP9Q49MG5 647 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 P3H4Q92791 437 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 FBXO32Q969P5 355 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 GJB5O95377 273 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 SOD2P04179 222 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 TUBBP07437 444 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 ADRA1BP35368 520 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 VCPP55072 806 aaKnown RBP14.45□□□□□ -0.1
SMPD4-219ENST00000491128 DPYSL2Q16555 572 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 HP1BP3Q5SSJ5 553 aaPredicted RBP14.45□□□□□ -0.1
SMPD4-219ENST00000491128 TMEM240Q5SV17 173 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 VSTM1Q6UX27 236 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 BNIPLQ7Z465 357 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 OR2W6PQ8NHA6 318 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 UHMK1Q8TAS1 419 aaKnown RBP14.45□□□□□ -0.1
SMPD4-219ENST00000491128 FUBP3Q96I24 572 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMPD4-219ENST00000491128 CYP4F11Q9HBI6 524 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 ALG13Q9NP73 1137 aaKnown RBP14.45□□□□□ -0.1
SMPD4-219ENST00000491128 ZDHHC18Q9NUE0 388 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 MTRRQ9UBK8 725 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 ATP8A1Q9Y2Q0 1164 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 NLRC5Q86WI3 1866 aa14.45□□□□□ -0.1
SMPD4-219ENST00000491128 GRXCR1A8MXD5 290 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 H7C0C1 242 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 H7C4K7 107 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 APOC4-APOC2K7ER74 178 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 APOL1O14791 398 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 EFEMP2O95967 443 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 APOC2P02655 101 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 IVDP26440 423 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 PTPN7P35236 360 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 ATP5OP48047 213 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 CBX1P83916 185 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 PPARDQ03181 441 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms