RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 GCNAQ96QF7 691 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 TWNKQ96RR1 684 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 LHX5Q9H2C1 402 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 HMGXB4Q9UGU5 601 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
PCCB-218ENST00000490504 SCINQ9Y6U3 715 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 ARNTLO00327 626 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 DDX3YO15523 660 aaKnown RBP16.41■□□□□ 0.22
PCCB-218ENST00000490504 CSH1P0DML2 217 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 CSH2P0DML3 217 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 VDRP11473 427 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 TARSP26639 723 aaKnown RBP16.41■□□□□ 0.22
PCCB-218ENST00000490504 NDST1P52848 882 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 C2orf54Q08AI8 447 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 SCN4BQ8IWT1 228 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 C1orf131Q8NDD1 294 aaKnown RBP16.41■□□□□ 0.22
PCCB-218ENST00000490504 OR6B3Q8NGW1 331 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 FUBP3Q96I24 572 aaKnown RBP eCLIP16.41■□□□□ 0.22
PCCB-218ENST00000490504 SMG9Q9H0W8 520 aaKnown RBP16.41■□□□□ 0.22
PCCB-218ENST00000490504 SNX25Q9H3E2 840 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 MRPL47Q9HD33 250 aaKnown RBP16.41■□□□□ 0.22
PCCB-218ENST00000490504 TRPV5Q9NQA5 729 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 SMARCAL1Q9NZC9 954 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 EHD2Q9NZN4 543 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 ANAPC7Q9UJX3 599 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 KIAA1257Q9ULG3 409 aa16.41■□□□□ 0.22
PCCB-218ENST00000490504 SLC38A8A6NNN8 435 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 DPYSL4O14531 572 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 H2AFXP16104 143 aaPredicted RBP16.4■□□□□ 0.22
PCCB-218ENST00000490504 WEE1P30291 646 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 FCHO2Q0JRZ9 810 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 ORC1Q13415 861 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 PLEKHA7Q6IQ23 1121 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 DENND1BQ6P3S1 775 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 ZNF852Q6ZMS4 543 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 YAF2Q8IY57 180 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 MMGT1Q8N4V1 131 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 UBL4BQ8N7F7 174 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 ACTRT1Q8TDG2 376 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 BTBD6Q96KE9 485 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 OSBPL6Q9BZF3 934 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 EPC1Q9H2F5 836 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 ANKZF1Q9H8Y5 726 aa16.4■□□□□ 0.22
PCCB-218ENST00000490504 ARGLU1Q9NWB6 273 aaPredicted RBP16.4■□□□□ 0.22
PCCB-218ENST00000490504 CHADO15335 359 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 CEP104O60308 925 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 FAM163BP0C2L3 166 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 RHOXF2BP0C7M4 288 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 COMTP21964 271 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 BDNFP23560 247 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 NBL1P41271 181 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 MAGEA11P43364 429 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 FZD5Q13467 585 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 TXNDC8Q6A555 127 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 FBXO38Q6PIJ6 1188 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 C1orf210Q8IVY1 113 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 RASGEF1CQ8N431 466 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 MAB21L3Q8N8X9 362 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 ZFYVE19Q96K21 471 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 RHOXF2Q9BQY4 288 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 PARD6BQ9BYG5 372 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 CARD9Q9H257 536 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 DPEP3Q9H4B8 488 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 PARVAQ9NVD7 372 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 PIAS3Q9Y6X2 628 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 ZFHX2Q9C0A1 2572 aaPredicted RBP16.39■□□□□ 0.21
PCCB-218ENST00000490504 USP34Q70CQ2 3546 aa16.39■□□□□ 0.21
PCCB-218ENST00000490504 PGRMC1O00264 195 aaKnown RBP16.38■□□□□ 0.21
PCCB-218ENST00000490504 SPOPO43791 374 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 TUBBP07437 444 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 PTPN1P18031 435 aaKnown RBP16.38■□□□□ 0.21
PCCB-218ENST00000490504 MAMLD1Q13495 774 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 STILQ15468 1287 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 MAPRE1Q15691 268 aaKnown RBP16.38■□□□□ 0.21
PCCB-218ENST00000490504 CNGA2Q16280 664 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 C2CD6Q53TS8 623 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 MDH1BQ5I0G3 518 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 CCDC70Q6NSX1 233 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 PHLDB2Q86SQ0 1253 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 ERICH1Q86X53 443 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 CMTM8Q8IZV2 173 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 ZNF687Q8N1G0 1237 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 WDTC1Q8N5D0 677 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 PCED1BQ96HM7 432 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 MYRFLQ96LU7 910 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 HEXIM2Q96MH2 286 aaKnown RBP16.38■□□□□ 0.21
PCCB-218ENST00000490504 NELL2Q99435 816 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 OBP2AQ9NY56 170 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 STRIP2Q9ULQ0 834 aa16.38■□□□□ 0.21
PCCB-218ENST00000490504 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCCB-218ENST00000490504 PROB1E7EW31 1015 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 MYO1FO00160 1098 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 O00370 1275 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 MAN2B1O00754 1011 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 CTNNA2P26232 953 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms