RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 OLFML1Q6UWY5 402 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 CMC1Q7Z7K0 106 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 STK32AQ8WU08 396 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 NLRP7Q8WX94 980 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 PGBD4Q96DM1 585 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 NAF1Q96HR8 494 aaKnown RBP13.76□□□□□ -0.21
TNXB-206ENST00000490077 AGAP3Q96P47 875 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 CYTH2Q99418 400 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 PRR5-ARHGAP8B1AHC4 643 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 GJA5P36382 358 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 MLH1P40692 756 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 EFNA5P52803 228 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 ARHGAP8P85298 464 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 THOC5Q13769 683 aaKnown RBP13.76□□□□□ -0.21
TNXB-206ENST00000490077 NAIF1Q69YI7 327 aaPredicted RBP13.76□□□□□ -0.21
TNXB-206ENST00000490077 MAMDC4Q6UXC1 1216 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 HFE2Q6ZVN8 426 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 NDUFAF2Q8N183 169 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
TNXB-206ENST00000490077 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.76□□□□□ -0.21
TNXB-206ENST00000490077 SKA1Q96BD8 255 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 NXF3Q9H4D5 531 aaKnown RBP13.76□□□□□ -0.21
TNXB-206ENST00000490077 TXLNGQ9NUQ3 528 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 SETD4Q9NVD3 440 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 NMRK1Q9NWW6 199 aa13.76□□□□□ -0.21
TNXB-206ENST00000490077 PPARGC1AQ9UBK2 798 aaKnown RBP13.76□□□□□ -0.21
TNXB-206ENST00000490077 LTBP3Q9NS15 1303 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 PTPRFP10586 1907 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 FAM72CH0Y354 149 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 KCNK1O00180 336 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 ENDOD1O94919 500 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
TNXB-206ENST00000490077 TMPRSS15P98073 1019 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 SLC25A3Q00325 362 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
TNXB-206ENST00000490077 RASA2Q15283 850 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 FAM72AQ5TYM5 149 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 FAM72DQ6L9T8 149 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 CASC4Q6P4E1 433 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 MAVSQ7Z434 540 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 FAM72BQ86X60 149 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 GBP7Q8N8V2 638 aaPredicted RBP13.75□□□□□ -0.21
TNXB-206ENST00000490077 RBM15BQ8NDT2 890 aaKnown RBP13.75□□□□□ -0.21
TNXB-206ENST00000490077 SIGLEC10Q96LC7 697 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 ZCWPW1Q9H0M4 648 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 LHX5Q9H2C1 402 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 GBA2Q9HCG7 927 aaPredicted RBP13.75□□□□□ -0.21
TNXB-206ENST00000490077 G3BP2Q9UN86 482 aaKnown RBP13.75□□□□□ -0.21
TNXB-206ENST00000490077 HAUS5O94927 633 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 ERVK-10P10266 1014 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 CYP2F1P24903 491 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 RGS9BPQ6ZS82 235 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 KCTD15Q96SI1 283 aaPredicted RBP13.75□□□□□ -0.21
TNXB-206ENST00000490077 CAB39LQ9H9S4 337 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 PNPOQ9NVS9 261 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 UBP1Q9NZI7 540 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 EMCNQ9ULC0 261 aa13.75□□□□□ -0.21
TNXB-206ENST00000490077 B2RBV5 119 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 COPEO14579 308 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 ZBED1O96006 694 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 PTPN4P29074 926 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 PTPN7P35236 360 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 TMEM132DQ14C87 1099 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 SLC45A4Q5BKX6 768 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 MARCH8Q5T0T0 291 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 RIBC1Q8N443 379 aaPredicted RBP13.74□□□□□ -0.21
TNXB-206ENST00000490077 OR6B3Q8NGW1 331 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 APOPT1Q96IL0 206 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 LOC100653049A0A140TA62 436 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 CAPN9O14815 690 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 GYG2O15488 501 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 KRT34O76011 436 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 ZWINTO95229 277 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 PRKCGP05129 697 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 LGALS2P05162 132 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
TNXB-206ENST00000490077 SOX4Q06945 474 aaPredicted RBP13.74□□□□□ -0.21
TNXB-206ENST00000490077 CCDC15Q0P6D6 951 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
TNXB-206ENST00000490077 RNF220Q5VTB9 566 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 IL31Q6EBC2 164 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 RNF111Q6ZNA4 994 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 TMEM40Q8WWA1 233 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 RSRC1Q96IZ7 334 aaKnown RBP13.74□□□□□ -0.21
TNXB-206ENST00000490077 PLCD4Q9BRC7 762 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 CNPY3Q9BT09 278 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 OSBPL1AQ9BXW6 950 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 TRIM55Q9BYV6 548 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 ZNF518BQ9C0D4 1074 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 TMEM30AQ9NV96 361 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 STRIP2Q9ULQ0 834 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 TIMM13Q9Y5L4 95 aaPredicted RBP13.74□□□□□ -0.21
TNXB-206ENST00000490077 SIP14410 1827 aa13.74□□□□□ -0.21
TNXB-206ENST00000490077 TSPAN1O60635 241 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 DNAJC6O75061 913 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms