RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 USP18Q9UMW8 372 aa12.41□□□□□ -0.42
SRSF4-204ENST00000489898 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
SRSF4-204ENST00000489898 SH3BP1Q9Y3L3 701 aa12.41□□□□□ -0.42
SRSF4-204ENST00000489898 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
SRSF4-204ENST00000489898 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 STX10O60499 249 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 BRD2P25440 801 aaKnown RBP12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TIE1P35590 1138 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 MPLP40238 635 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TNFRSF4P43489 277 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 PSEN1P49768 467 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TKTL1P51854 596 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 LIMK1P53667 647 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 MFAP3P55082 362 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 STX17P56962 302 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 GCNT1Q02742 428 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 BST2Q10589 180 aaKnown RBP12.4□□□□□ -0.42
SRSF4-204ENST00000489898 LRMPQ12912 555 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 NR1H3Q13133 447 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TRIP4Q15650 581 aaPredicted RBP12.4□□□□□ -0.42
SRSF4-204ENST00000489898 GEN1Q17RS7 908 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 KLHL10Q6JEL2 608 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 CACNA2D4Q7Z3S7 1137 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TTC39CQ8N584 583 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TSTD1Q8NFU3 115 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TSG101Q99816 390 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 SIX2Q9NPC8 291 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 ACP6Q9NPH0 428 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 DNMT3LQ9UJW3 386 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 SLC27A6Q9Y2P4 619 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 LOC400499M0QZD8 3231 aa12.4□□□□□ -0.42
SRSF4-204ENST00000489898 PTPRBP23467 1997 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 LNP1A1A4G5 178 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 BCLAF3A2AJT9 711 aaKnown RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 PATE3B3GLJ2 98 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 P4HA2O15460 535 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 MSI1O43347 362 aaKnown RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 CLSTN1O94985 981 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 ZBED1O96006 694 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 APODP05090 189 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 PAEPP09466 180 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 HOXD9P28356 352 aaPredicted RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 YWHAGP61981 247 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 FOXK2Q01167 660 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 EFEMP1Q12805 493 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 PAK1Q13153 545 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 EIF4EBP2Q13542 120 aaPredicted RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 HSF5Q4G112 596 aaPredicted RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 C10orf120Q5SQS8 335 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 C10orf76Q5T2E6 689 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 CPXM2Q8N436 756 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 GPR161Q8N6U8 529 aaKnown RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 UBA3Q8TBC4 463 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 NETO1Q8TDF5 533 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 RLN3Q8WXF3 142 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 LMLNQ96KR4 655 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 PRICKLE1Q96MT3 831 aaPredicted RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 SLC6A17Q9H1V8 727 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 METTL14Q9HCE5 456 aaKnown RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 DNAJC17Q9NVM6 304 aaKnown RBP12.39□□□□□ -0.43
SRSF4-204ENST00000489898 PLK2Q9NYY3 685 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 RASAL2Q9UJF2 1139 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 INVSQ9Y283 1065 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 PCDHGA5Q9Y5G8 931 aa12.39□□□□□ -0.43
SRSF4-204ENST00000489898 DSPP15924 2871 aaKnown RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 PRR5-ARHGAP8B1AHC4 643 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 IGLV3-25P01717 112 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 VDRP11473 427 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 NDUFV2P19404 249 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 TBXAS1P24557 533 aaPredicted RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 PTGER3P43115 390 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 DGKEP52429 567 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 ARHGAP8P85298 464 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 KCNH2Q12809 1159 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 FAM133BQ5BKY9 247 aaKnown RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 ARTNQ5T4W7 220 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 NADSYN1Q6IA69 706 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 GJB7Q6PEY0 223 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 TMEM270Q6UE05 265 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 RRAGAQ7L523 313 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 DGLUCYQ7Z3D6 616 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 KIAA0907Q7Z7F0 614 aaPredicted RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 NT5C1BQ96P26 610 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 BBS2Q9BXC9 721 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 INTS2Q9H0H0 1204 aaKnown RBP12.38□□□□□ -0.43
SRSF4-204ENST00000489898 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms