RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 DGKHQ86XP1 1220 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DCP2Q8IU60 420 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CLVS1Q8IUQ0 354 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 FBXW8Q8N3Y1 598 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ANGPTL6Q8NI99 470 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 OLIG1Q8TAK6 271 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TCP10LQ8TDR4 215 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ADAMTS16Q8TE57 1224 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PSPC1Q8WXF1 523 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 LARP4BQ92615 738 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 HPS1Q92902 700 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CD101Q93033 1021 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 C12orf43Q96C57 262 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ARHGEF26Q96DR7 871 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CEP95Q96GE4 821 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 EGLN2Q96KS0 407 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 C7orf26Q96N11 449 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SYT11Q9BT88 431 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DCLK3Q9C098 648 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 KLHL25Q9H0H3 589 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 THAP2Q9H0W7 228 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SIAEQ9HAT2 523 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SIX2Q9NPC8 291 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 LRRC4BQ9NT99 713 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 RIC8BQ9NVN3 520 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ZMAT5Q9UDW3 170 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 BCAP29Q9UHQ4 241 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ITGA11Q9UKX5 1188 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PCDHGB4Q9UN71 923 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PCDHA6Q9UN73 950 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC8A2Q9UPR5 921 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 POMPQ9Y244 141 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF652Q9Y2D9 606 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 MYRFQ9Y2G1 1151 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ATP11BQ9Y2G3 1177 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DNAJC16Q9Y2G8 782 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 RBMX2Q9Y388 322 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PCDHGB5Q9Y5G0 923 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PCDHA8Q9Y5H6 950 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ASTN2O75129 1339 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 IGSF9BQ9UPX0 1349 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TIAM2Q8IVF5 1701 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 PHRF1Q9P1Y6 1649 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 NRXN3Q9Y4C0 1643 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 A0A087WXM4 84 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 A0A1W2PQ67 120 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 GOLGA8MH3BSY2 632 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 M0QX08 132 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 AREL1O15033 823 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 ADAMTS3O15072 1205 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 SPOPO43791 374 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 FAM189A1O60320 539 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 SNAP91O60641 907 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 GMNNO75496 209 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 UFL1O94874 794 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 ADH1AP07327 375 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 ABCB1P08183 1280 aaPredicted RBP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 ETV3P41162 512 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 TECP42680 631 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 YWHAGP61981 247 aaKnown RBP eCLIP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 GPC5P78333 572 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 IFITM2Q01629 132 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 HSPA14Q0VDF9 509 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 STX3Q13277 289 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 CLN3Q13286 438 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 TUBA3CQ13748 450 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 ADGRE1Q14246 886 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 GK3PQ14409 553 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 SHROOM1Q2M3G4 852 aaPredicted RBP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 HSF5Q4G112 596 aaPredicted RBP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 EFHC2Q5JST6 749 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 FAM26FQ5R3K3 315 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 TMTC4Q5T4D3 741 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 C6orf52Q5T4I8 152 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 KAZNQ674X7 775 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 SCARA3Q6AZY7 606 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 CYP4F22Q6NT55 531 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 ZFP1Q6P2D0 407 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 PAOXQ6QHF9 649 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 USP43Q70EL4 1123 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 CADM3Q8N126 398 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 CCDC33Q8N5R6 958 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 MIGA1Q8NAN2 632 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 PDPRQ8NCN5 879 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 HCAR2Q8TDS4 363 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 ACMSDQ8TDX5 336 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 C1orf54Q8WWF1 131 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 GIMAP1Q8WWP7 306 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 RASSF5Q8WWW0 418 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 IP6K1Q92551 441 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 RAD54LQ92698 747 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 CCDC74AQ96AQ1 378 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 TMA16Q96EY4 203 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 MRGPRX2Q96LB1 330 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 PNMA5Q96PV4 448 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 TCF12Q99081 682 aa4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 TRIM56Q9BRZ2 755 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-206ENST00000489853 CENPOQ9BU64 300 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms