RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 GKAP1Q5VSY0 366 aaPredicted RBP8.81□□□□□ -1
VTI1A-207ENST00000489357 SCARA3Q6AZY7 606 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 OLFML1Q6UWY5 402 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 LRRC8DQ7L1W4 858 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 PHLDB2Q86SQ0 1253 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 TADA2BQ86TJ2 420 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 CCDC25Q86WR0 208 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 ARFGAP1Q8N6T3 406 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 JOSD2Q8TAC2 188 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 DNAJB3Q8WWF6 145 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 HERVK_113Q902F9 699 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 RTP4Q96DX8 246 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 CHMP6Q96FZ7 201 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SGSM3Q96HU1 749 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SCLYQ96I15 445 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 XPO6Q96QU8 1125 aaKnown RBP8.81□□□□□ -1
VTI1A-207ENST00000489357 UCN2Q96RP3 112 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 CCT8L2Q96SF2 557 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 PLCD4Q9BRC7 762 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 MAK16Q9BXY0 300 aaKnown RBP8.81□□□□□ -1
VTI1A-207ENST00000489357 ADAM7Q9H2U9 754 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SSU72Q9NP77 194 aaKnown RBP8.81□□□□□ -1
VTI1A-207ENST00000489357 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 NINJ2Q9NZG7 142 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 RSPH14Q9UHP6 348 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SLC24A2Q9UI40 661 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 RRP15Q9Y3B9 282 aaKnown RBP8.81□□□□□ -1
VTI1A-207ENST00000489357 PCDHB11Q9Y5F2 797 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SNX9Q9Y5X1 595 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SMIM28A0A1B0GU29 152 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 E5RJQ4 531 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 E7ESA3 106 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 PI4K2BG5E9Z4 385 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 SGK1O00141 431 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 KIAA0754O94854 1291 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 AVPP01185 164 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 SKIP12755 728 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 WARSP23381 471 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 GJC1P36383 396 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 THPOP40225 353 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 MAGEA4P43358 317 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 CCT5P48643 541 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ZNF135P52742 658 aaPredicted RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 ARL4CP56559 192 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 WDR4P57081 412 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 CORO7P57737 925 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 OTUD4Q01804 1114 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 PLCB3Q01970 1234 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 GPS1Q13098 491 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 NOMO1Q15155 1222 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 HIF1AQ16665 826 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 SOWAHAQ2M3V2 549 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ATP13A4Q4VNC1 1196 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 EFHC1Q5JVL4 640 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 KAZNQ674X7 775 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ARHGEF18Q6ZSZ5 1173 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 FAM183BPQ6ZVS7 135 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 BZW1Q7L1Q6 419 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 STRADAQ7RTN6 431 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 CRIPAKQ8N1N5 446 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 TMEM86AQ8N2M4 240 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ANKS4BQ8N8V4 417 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 APPL2Q8NEU8 664 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ACTL9Q8TC94 416 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ZNF473Q8WTR7 871 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 RXFP2Q8WXD0 754 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 RSAD2Q8WXG1 361 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 KCTD13Q8WZ19 329 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 CENPIQ92674 756 aaPredicted RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 APBB2Q92870 758 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ARHGEF2Q92974 986 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 FAF2Q96CS3 445 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 ZNF668Q96K58 619 aaPredicted RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 ZMAT2Q96NC0 199 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 OSMRQ99650 979 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 FAM49AQ9H0Q0 323 aaPredicted RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 SNX25Q9H3E2 840 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 TMPRSS4Q9NRS4 437 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 INTS9Q9NV88 658 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 SNTG2Q9NY99 539 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 EURLQ9NYK6 297 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 HMGXB4Q9UGU5 601 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 PIN4Q9Y237 131 aaKnown RBP8.8□□□□□ -1
VTI1A-207ENST00000489357 NOD1Q9Y239 953 aa8.8□□□□□ -1
VTI1A-207ENST00000489357 SF3B1O75533 1304 aaKnown RBP eCLIP8.8□□□□□ -1
VTI1A-207ENST00000489357 TLDC2A0PJX2 215 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 ARHGEF37A1IGU5 675 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 BCLAF3A2AJT9 711 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 A8MXQ7 604 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 XPO1O14980 1071 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 CHADO15335 359 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 HUS1O60921 280 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 CSDE1O75534 798 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 ZIC2O95409 532 aaPredicted RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 GJB6O95452 261 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 ACSL3O95573 720 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 FGBP02675 491 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 GSTA2P09210 222 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 ACRP10323 421 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms