RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 INSL5Q9Y5Q6 135 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 ALPK3Q96L96 1907 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 GRXCR1A8MXD5 290 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 ZNF487B1APH4 448 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 H3BRJ5 948 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 IRAK2O43187 625 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 GLUD1P00367 558 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 LRG1P02750 347 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 TUBBP07437 444 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 CD48P09326 243 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 RARGP13631 454 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 FNTAP49354 379 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 CXCR3P49682 368 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 DYNLT1P63172 113 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 DR1Q01658 176 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 TWF1Q12792 350 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 KLF1Q13351 362 aaPredicted RBP10.41□□□□□ -0.74
USP11-211ENST00000489111 DHX34Q14147 1143 aaKnown RBP10.41□□□□□ -0.74
USP11-211ENST00000489111 DPYSL3Q14195 570 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 DPYSL2Q16555 572 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 C10orf120Q5SQS8 335 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 MSANTD2Q6P1R3 559 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 BBS12Q6ZW61 710 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 MAATS1Q7Z4T9 603 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 CCDC105Q8IYK2 499 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 ELMOD1Q8N336 334 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 PRELID2Q8N945 189 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 MRPL43Q8N983 215 aaKnown RBP10.41□□□□□ -0.74
USP11-211ENST00000489111 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
USP11-211ENST00000489111 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 SPPL3Q8TCT6 385 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 C1orf54Q8WWF1 131 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 ATG4AQ8WYN0 398 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 OVCA2Q8WZ82 227 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 RUBCNQ92622 972 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 KLHL5Q96PQ7 755 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 NACA2Q9H009 215 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 WDCPQ9H6R7 721 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP11-211ENST00000489111 ARGLU1Q9NWB6 273 aaPredicted RBP10.41□□□□□ -0.74
USP11-211ENST00000489111 CALCOCO1Q9P1Z2 691 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 UXTQ9UBK9 157 aaPredicted RBP10.41□□□□□ -0.74
USP11-211ENST00000489111 MSRAQ9UJ68 235 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 FBXW11Q9UKB1 542 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 FZD10Q9ULW2 581 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 NR2E1Q9Y466 385 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 IRAK3Q9Y616 596 aa10.41□□□□□ -0.74
USP11-211ENST00000489111 C2orf71A6NGG8 1288 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 APOL1O14791 398 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 MSI1O43347 362 aaKnown RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 RAD51CO43502 376 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 TGM5O43548 720 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 CST8O60676 142 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 ARHGEF15O94989 841 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 GAS8O95995 478 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 IGLV3-25P01717 112 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 APOEP02649 317 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 SLC2A3P11169 496 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 ZFXP17010 805 aaPredicted RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 L1CAMP32004 1257 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 CCR1P32246 355 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 ADRA1BP35368 520 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 PGFP49763 221 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 ARSEP51690 589 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 ERVFC1P60507 584 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 SCAPQ12770 1279 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 EFEMP1Q12805 493 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 MMRN1Q13201 1228 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 SNX1Q13596 522 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 SIX1Q15475 284 aaPredicted RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 RAB30Q15771 203 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 TAZQ16635 292 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 CYP1B1Q16678 543 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 CA9Q16790 459 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 BRMS1LQ5PSV4 323 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 CCDC137Q6PK04 289 aaKnown RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 ANKS1BQ7Z6G8 1248 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 KREMEN2Q8NCW0 462 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 GRK7Q8WTQ7 553 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 CASP10Q92851 521 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 HAUS1Q96CS2 278 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 TRMT2BQ96GJ1 504 aaKnown RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 CCDC114Q96M63 670 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 KCTD15Q96SI1 283 aaPredicted RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 EPAS1Q99814 870 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 HERPUD2Q9BSE4 406 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 LRRC1Q9BTT6 524 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 FRMD8P1Q9BZ68 369 aaPredicted RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 DCLK3Q9C098 648 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 ANKZF1Q9H8Y5 726 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 WDR6Q9NNW5 1121 aaKnown RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 OSER1Q9NX31 292 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 TRPM5Q9NZQ8 1165 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 MARCH2Q9P0N8 246 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 STIM2Q9P246 746 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 RCOR3Q9P2K3 495 aaPredicted RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 AMACRQ9UHK6 382 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 FEZ2Q9UHY8 353 aaPredicted RBP10.4□□□□□ -0.74
USP11-211ENST00000489111 ASB3Q9Y575 518 aa10.4□□□□□ -0.74
USP11-211ENST00000489111 FAM187AA6NFU0 413 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms