RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 UBXN1Q04323 297 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 Q6ZNB5 142 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 TMEM110Q86TL2 294 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 SLC47A2Q86VL8 602 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 DENND1CQ8IV53 801 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 PASD1Q8IV76 773 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 NEK11Q8NG66 645 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 RPLP0P6Q8NHW5 317 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 IPO4Q8TEX9 1081 aaKnown RBP14.92□□□□□ -0.02
BRCA1-218ENST00000489037 SPAG5Q96R06 1193 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 LHX5Q9H2C1 402 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 SYNCQ9H7C4 482 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 MARK1Q9P0L2 795 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 AJAP1Q9UKB5 411 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-218ENST00000489037 PTPRZ1P23471 2315 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 LGALS16A8MUM7 142 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 E5RJQ4 531 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 GREM1O60565 184 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 GFRA3O60609 400 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 TULP3O75386 442 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 GABBR2O75899 941 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 TYRP14679 529 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 TNFRSF4P43489 277 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 ZNF165P49910 485 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 SEC13P55735 322 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 POLR2FP61218 127 aaKnown RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 TPM4P67936 248 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 MRPS21P82921 87 aaKnown RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 KDSRQ06136 332 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 PDCLQ13371 301 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 TRIP4Q15650 581 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 SKOR2Q2VWA4 1001 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 GAB4Q2WGN9 574 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 FILIP1LQ4L180 1135 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 MSANTD2Q6P1R3 559 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 UNC45BQ8IWX7 931 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 TMEM35BQ8NCS4 154 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 CLEC4CQ8WTT0 213 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 PPP1R13BQ96KQ4 1090 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 NAA15Q9BXJ9 866 aaKnown RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 FAM207AQ9NSI2 230 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 DNAJC17Q9NVM6 304 aaKnown RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 AGO1Q9UL18 857 aaKnown RBP14.91□□□□□ -0.02
BRCA1-218ENST00000489037 KIAA1549LQ6ZVL6 1849 aa14.91□□□□□ -0.02
BRCA1-218ENST00000489037 LRRC10BA6NIK2 292 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 LATS1O95835 1130 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 LMNAP02545 664 aaKnown RBP14.9□□□□□ -0.02
BRCA1-218ENST00000489037 KLKB1P03952 638 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 PNMA6AP0CW24 399 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-218ENST00000489037 CYP11B1P15538 503 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 ZNF18P17022 549 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 TBX4P57082 545 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 ZNF445P59923 1031 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 NCAPHQ15003 741 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 SYCP1Q15431 976 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 HSF5Q4G112 596 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-218ENST00000489037 C2orf27AQ580R0 203 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 EFHC1Q5JVL4 640 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 NUGGCQ68CJ6 796 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 DPY19L2P1Q6NXN4 242 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 BEND5Q7L4P6 421 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 C12orf40Q86WS4 652 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 ETFBKMTQ8IXQ9 262 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 CPXM2Q8N436 756 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 ZBTB44Q8NCP5 570 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 MSANTD4Q8NCY6 345 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 SERPINB11Q96P15 392 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 POPDC2Q9HBU9 364 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 RAB23Q9ULC3 237 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 RIF1Q5UIP0 2472 aaKnown RBP14.9□□□□□ -0.02
BRCA1-218ENST00000489037 FAM186AA6NE01 2351 aa14.9□□□□□ -0.02
BRCA1-218ENST00000489037 A0A0A0MRY4 1105 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 F8VZ95 297 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 K7EQS6 105 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 PAPSS1O43252 624 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-218ENST00000489037 CACNG3O60359 315 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 GLI1P08151 1106 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 HOXA6P31267 233 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 CNR2P34972 360 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 STAT1P42224 750 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 SLC11A2P49281 568 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 DGKGP49619 791 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 YWHAZP63104 245 aaKnown RBP14.89□□□□□ -0.03
BRCA1-218ENST00000489037 DMC1Q14565 340 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 HEATR6Q6AI08 1181 aaKnown RBP14.89□□□□□ -0.03
BRCA1-218ENST00000489037 OR6B2Q6IFH4 312 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 TOGARAM2Q6ZUX3 1019 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 SYT13Q7L8C5 426 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 TRMT11Q7Z4G4 463 aaKnown RBP14.89□□□□□ -0.03
BRCA1-218ENST00000489037 LONP2Q86WA8 852 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 ZNF677Q86XU0 584 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 CAMKK1Q8N5S9 505 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 C1orf131Q8NDD1 294 aaKnown RBP14.89□□□□□ -0.03
BRCA1-218ENST00000489037 USP33Q8TEY7 942 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 DDI1Q8WTU0 396 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 NELL1Q92832 810 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 BHMTQ93088 406 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 DDX50Q9BQ39 737 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms