RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 SFMBT1Q9UHJ3 866 aa16.66■□□□□ 0.26
HDAC7-224ENST00000488927 TMEM59LQ9UK28 342 aa16.66■□□□□ 0.26
HDAC7-224ENST00000488927 A0A087X0T9 212 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 GRAP2O75791 330 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 FAM228BP0C875 321 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 IFNAR2P48551 515 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 HARS2P49590 506 aaKnown RBP16.65■□□□□ 0.26
HDAC7-224ENST00000488927 GSDMDP57764 484 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
HDAC7-224ENST00000488927 RING1Q06587 406 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 MTA1Q13330 715 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 TRIP4Q15650 581 aaPredicted RBP16.65■□□□□ 0.26
HDAC7-224ENST00000488927 ASTE1Q2TB18 679 aaPredicted RBP16.65■□□□□ 0.26
HDAC7-224ENST00000488927 CCDC122Q5T0U0 273 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 SYPL2Q5VXT5 272 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 NUGGCQ68CJ6 796 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 UNC45BQ8IWX7 931 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 ANP32BQ92688 251 aaKnown RBP16.65■□□□□ 0.26
HDAC7-224ENST00000488927 KHSRPQ92945 711 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDAC7-224ENST00000488927 ATP2A3Q93084 1043 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 FAM83CQ9BQN1 747 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 TLR6Q9Y2C9 796 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 SCINQ9Y6U3 715 aa16.65■□□□□ 0.26
HDAC7-224ENST00000488927 FAM170AA1A519 330 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 TNFRSF10AO00220 468 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 STC2O76061 302 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 LATS1O95835 1130 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 TRUB2O95900 331 aaKnown RBP16.64■□□□□ 0.25
HDAC7-224ENST00000488927 F9P00740 461 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 IRF1P10914 325 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 SLC2A3P11169 496 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 DESP17661 470 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 RRM1P23921 792 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 TBX4P57082 545 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 GPC5P78333 572 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 ZXDAP98168 799 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 SLC25A52Q3SY17 297 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 TAC4Q86UU9 113 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 TMTC1Q8IUR5 882 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 CCDC170Q8IYT3 715 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 SPC24Q8NBT2 197 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 RIN3Q8TB24 985 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 CSGALNACT1Q8TDX6 532 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 CHP1Q99653 195 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 DDX23Q9BUQ8 820 aaKnown RBP16.64■□□□□ 0.25
HDAC7-224ENST00000488927 FAM204AQ9H8W3 233 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 MRPL47Q9HD33 250 aaKnown RBP16.64■□□□□ 0.25
HDAC7-224ENST00000488927 METTL5Q9NRN9 209 aaKnown RBP16.64■□□□□ 0.25
HDAC7-224ENST00000488927 WNT16Q9UBV4 365 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 VCANP13611 3396 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 A0A0C4DFX4 3053 aa16.64■□□□□ 0.25
HDAC7-224ENST00000488927 ARNTLO00327 626 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 IRAK2O43187 625 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 NARSO43776 548 aaKnown RBP16.63■□□□□ 0.25
HDAC7-224ENST00000488927 NFATC1O95644 943 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 IGLV3-25P01717 112 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 IGLV3-27P01718 113 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 GLULP15104 373 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 FECHP22830 423 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 SDC4P31431 198 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 MLLT6P55198 1093 aaPredicted RBP16.63■□□□□ 0.25
HDAC7-224ENST00000488927 AMPD2Q01433 879 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 GFPT1Q06210 699 aaPredicted RBP16.63■□□□□ 0.25
HDAC7-224ENST00000488927 NR1H3Q13133 447 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 C10orf76Q5T2E6 689 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 PLEKHA7Q6IQ23 1121 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 DCUN1D2Q6PH85 259 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 C1orf228Q6PIY5 440 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 SND1Q7KZF4 910 aaKnown RBP eCLIP16.63■□□□□ 0.25
HDAC7-224ENST00000488927 CPA6Q8N4T0 437 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 EDAQ92838 391 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 NT5C3BQ969T7 300 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 AZIN2Q96A70 460 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 ZNF653Q96CK0 615 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 PGAP3Q96FM1 320 aaPredicted RBP16.63■□□□□ 0.25
HDAC7-224ENST00000488927 MSANTD3Q96H12 275 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 NPY6RQ99463 290 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
HDAC7-224ENST00000488927 DDIT4Q9NX09 232 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 CNOT8Q9UFF9 292 aaKnown RBP16.63■□□□□ 0.25
HDAC7-224ENST00000488927 NENFQ9UMX5 172 aa16.63■□□□□ 0.25
HDAC7-224ENST00000488927 TCRBV5S1A1TA0A578 114 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 M0QYT0 321 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 MSI1O43347 362 aaKnown RBP16.62■□□□□ 0.25
HDAC7-224ENST00000488927 GREM1O60565 184 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 APOEP02649 317 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 HMBSP08397 361 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 PDGFRAP16234 1089 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 CORO1AP31146 461 aaKnown RBP16.62■□□□□ 0.25
HDAC7-224ENST00000488927 CYLC1P35663 651 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-224ENST00000488927 CHKAP35790 457 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 FLT3P36888 993 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 SULT1E1P49888 294 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 SIGLEC14Q08ET2 396 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 MAMLD1Q13495 774 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 RUNX3Q13761 415 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 EML3Q32P44 896 aa16.62■□□□□ 0.25
HDAC7-224ENST00000488927 ITPRIPL2Q3MIP1 535 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms