RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	EXOC3	O60645	756 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	NDST1	P52848	882 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	DLG4	P78352	724 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	SLC14A1	Q13336	389 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	NCOA4	Q13772	614 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	KNOP1	Q1ED39	458 aa	Known RBP	11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	ZNF423	Q2M1K9	1284 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	SDE2	Q6IQ49	451 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571		Q6ZNB5	142 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	PROSER1	Q86XN7	944 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	IQUB	Q8NA54	791 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	XPO6	Q96QU8	1125 aa	Known RBP	11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	FBXO44	Q9H4M3	255 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	NMUR1	Q9HB89	426 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	SLC39A2	Q9NP94	309 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	TLR8	Q9NR97	1041 aa	Known RBP	11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	FAM49B	Q9NUQ9	324 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	WDR35	Q9P2L0	1181 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	TFIP11	Q9UBB9	837 aa	Known RBP	11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	FBXO10	Q9UK96	956 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	ADAMTS20	P59510	1910 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	PLXNB3	Q9ULL4	1909 aa		11.98	□□□□□ -0.49
SNU13-208	ENST00000488571	GFRA2	O00451	464 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	MDM4	O15151	490 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	STX6	O43752	255 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	SYP	P08247	313 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	MAOB	P27338	520 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	ATP5C1	P36542	298 aa	Known RBP	11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	MLLT3	P42568	568 aa	Predicted RBP	11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	ASPA	P45381	313 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	DGKG	P49619	791 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	AP3M2	P53677	418 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	CUL4B	Q13620	913 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	HNRNPD	Q14103	355 aa	Known RBP	11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	TRIP6	Q15654	476 aa	Known RBP	11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	PLEKHG6	Q3KR16	790 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	SPOPL	Q6IQ16	392 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	CLEC20A	Q6ZU45	233 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	RGL4	Q8IZJ4	473 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	INTS4	Q96HW7	963 aa	Known RBP	11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	DMAC2	Q9NW81	257 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	PLK2	Q9NYY3	685 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	TSR3	Q9UJK0	312 aa	Known RBP	11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	NUDT5	Q9UKK9	219 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	SCML2	Q9UQR0	700 aa		11.97	□□□□□ -0.49
SNU13-208	ENST00000488571	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	PVALEF	A0A1B0GWK0	134 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571		A0A1W2PQH9	124 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	POLR2D	O15514	142 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	ZBTB24	O43167	697 aa	Predicted RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	CUTA	O60888	179 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	NDUFS2	O75306	463 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	CLSTN1	O94985	981 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	ASS1	P00966	412 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	FTH1P19	P0C7X4	201 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	ADORA2B	P29275	332 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	RDX	P35241	583 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	GRIK2	Q13002	908 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	ENPP2	Q13822	863 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	ACAP1	Q15027	740 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	ZACN	Q401N2	412 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	FUT11	Q495W5	492 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	KLHDC10	Q6PID8	442 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	METTL3	Q86U44	580 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	UNC93A	Q86WB7	457 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	NAXD	Q8IW45	347 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	PNPLA1	Q8N8W4	532 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	ADAMTS14	Q8WXS8	1223 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	DNASE2B	Q8WZ79	361 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	FOXJ1	Q92949	421 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	BHMT	Q93088	406 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	TWNK	Q96RR1	684 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	HNRNPAB	Q99729	332 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	MKRN2	Q9H000	416 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	MAGEF1	Q9HAY2	307 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	USP36	Q9P275	1121 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	SUSD2	Q9UGT4	822 aa		11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	LSM7	Q9UK45	103 aa	Known RBP	11.96	□□□□□ -0.49
SNU13-208	ENST00000488571	CELSR3	Q9NYQ7	3312 aa		11.96	□□□□□ -0.5
SNU13-208	ENST00000488571	PTPRB	P23467	1997 aa		11.96	□□□□□ -0.5
SNU13-208	ENST00000488571	FASN	P49327	2511 aa	Known RBP	11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	CKAP5	Q14008	2032 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	KCNJ18	B7U540	433 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	SMAP	O00193	183 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	KLRC4	O43908	158 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	CBFA2T3	O75081	653 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	STC2	O76061	302 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	YEATS4	O95619	227 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	PENK	P01210	267 aa	Predicted RBP	11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	KLKB1	P03952	638 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	FAM200B	P0CF97	657 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	ACO1	P21399	889 aa	Known RBP	11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	CD6	P30203	668 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	GOLGA8F	Q08AF8	430 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	GOLGA8DP	Q0D2H9	430 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	SCAP	Q12770	1279 aa		11.95	□□□□□ -0.5
SNU13-208	ENST00000488571	STK4	Q13043	487 aa		11.95	□□□□□ -0.5

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