RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 CCDC173Q0VFZ6 552 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 PTP4A2Q12974 167 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 STXBP5Q5T5C0 1151 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 KLHDC10Q6PID8 442 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 SLC26A9Q7LBE3 791 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 ARID3BQ8IVW6 561 aaPredicted RBP10.76□□□□□ -0.69
SKA1-204ENST00000488454 LRRC8AQ8IWT6 810 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 ZNF276Q8N554 614 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 ARL14EPQ8N8R7 260 aaPredicted RBP10.76□□□□□ -0.69
SKA1-204ENST00000488454 C3orf20Q8ND61 904 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 PRR7Q8TB68 274 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 CTNNBL1Q8WYA6 563 aaPredicted RBP10.76□□□□□ -0.69
SKA1-204ENST00000488454 EDEM1Q92611 657 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 SMARCD2Q92925 531 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 E2F7Q96AV8 911 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 ZSWIM3Q96MP5 696 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 ASB2Q96Q27 587 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 MYADMQ96S97 322 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 CYP2S1Q96SQ9 504 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 EIF3CQ99613 913 aaKnown RBP10.76□□□□□ -0.69
SKA1-204ENST00000488454 CCSER2Q9H7U1 834 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 OSER1Q9NX31 292 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.76□□□□□ -0.69
SKA1-204ENST00000488454 SCINQ9Y6U3 715 aa10.76□□□□□ -0.69
SKA1-204ENST00000488454 NDUFA10O95299 355 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 TBX18O95935 607 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 OAS1P00973 400 aaKnown RBP10.75□□□□□ -0.69
SKA1-204ENST00000488454 IL9P15248 144 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 WEE1P30291 646 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 GBP1P32455 592 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 NOS2P35228 1153 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 MATKP42679 507 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 RPIAP49247 311 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 KCNQ1P51787 676 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 KPNA1P52294 538 aaPredicted RBP10.75□□□□□ -0.69
SKA1-204ENST00000488454 GALCP54803 685 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 GSCP56915 257 aaPredicted RBP10.75□□□□□ -0.69
SKA1-204ENST00000488454 COG7P83436 770 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 EFEMP1Q12805 493 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 TAF5Q15542 800 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 TUSC1Q2TAM9 212 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 HFE2Q6ZVN8 426 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 MTSS1LQ765P7 747 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 ARCQ7LC44 396 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 BHLHA9Q7RTU4 235 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 DDX42Q86XP3 938 aaKnown RBP eCLIP10.75□□□□□ -0.69
SKA1-204ENST00000488454 DNAAF5Q86Y56 855 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 MIB1Q86YT6 1006 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 DEFB106AQ8N104 65 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 TXLNBQ8N3L3 684 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 TTC16Q8NEE8 873 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 OLIG1Q8TAK6 271 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 ASB16Q96NS5 453 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 RNF38Q9H0F5 515 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 THAP2Q9H0W7 228 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 ZFP14Q9HCL3 533 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 METTL5Q9NRN9 209 aaKnown RBP10.75□□□□□ -0.69
SKA1-204ENST00000488454 TDP1Q9NUW8 608 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 TMEM51Q9NW97 253 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 RRN3Q9NYV6 651 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 MARCH2Q9P0N8 246 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 EPS15L1Q9UBC2 864 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 PRKAG3Q9UGI9 489 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 RASAL2Q9UJF2 1139 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 NUDT5Q9UKK9 219 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 INTUQ9ULD6 942 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 STAP1Q9ULZ2 295 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 NAALADL1Q9UQQ1 740 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 PCDHA13Q9Y5I0 950 aa10.75□□□□□ -0.69
SKA1-204ENST00000488454 SLC12A8A0AV02 714 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 C2CD4DB7Z1M9 353 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 NRG2O14511 850 aaPredicted RBP10.74□□□□□ -0.69
SKA1-204ENST00000488454 ARHGAP6O43182 974 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 DAB1O75553 588 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 TMEM253P0C7T8 217 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 PDGFRAP16234 1089 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 SDC4P31431 198 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 SLC7A9P82251 487 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 MAMLD1Q13495 774 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 FAM78AQ5JUQ0 283 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 PLEKHA7Q6IQ23 1121 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 RAD9BQ6WBX8 426 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 SND1Q7KZF4 910 aaKnown RBP eCLIP10.74□□□□□ -0.69
SKA1-204ENST00000488454 KIAA1328Q86T90 577 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 ADHFE1Q8IWW8 467 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 YAF2Q8IY57 180 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 ZDHHC14Q8IZN3 488 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 CELF5Q8N6W0 485 aaKnown RBP10.74□□□□□ -0.69
SKA1-204ENST00000488454 RNF34Q969K3 372 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 NXPE3Q969Y0 559 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 PDLIM2Q96JY6 352 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 SERPINB11Q96P15 392 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 SLC2A13Q96QE2 648 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 FAM204AQ9H8W3 233 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 KIF9Q9HAQ2 790 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 THG1LQ9NWX6 298 aaKnown RBP10.74□□□□□ -0.69
SKA1-204ENST00000488454 SMPD4Q9NXE4 827 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 SFMBT1Q9UHJ3 866 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 TMEM59LQ9UK28 342 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms