RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ACAD10Q6JQN1 1059 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 DNAJC24Q6P3W2 148 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 VPS36Q86VN1 386 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 MCOLN2Q8IZK6 566 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 JOSD2Q8TAC2 188 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 OSCP1Q8WVF1 389 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 ZNF653Q96CK0 615 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 CHP1Q99653 195 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 TRIM62Q9BVG3 475 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 ADAM33Q9BZ11 813 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 EBF3Q9H4W6 596 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 HPS4Q9NQG7 708 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 SLC2A4RGQ9NR83 387 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 ZNHIT6Q9NWK9 470 aaKnown RBP11.53□□□□□ -0.56
UBE4B-210ENST00000488228 DUS2Q9NX74 493 aaKnown RBP11.53□□□□□ -0.56
UBE4B-210ENST00000488228 GTSE1Q9NYZ3 720 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 COX16Q9P0S2 106 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 NENFQ9UMX5 172 aa11.53□□□□□ -0.56
UBE4B-210ENST00000488228 ATG2BQ96BY7 2078 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 TCRBV5S1A1TA0A578 114 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 CHADO15335 359 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 IRAK2O43187 625 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 TRUB2O95900 331 aaKnown RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 IGLV3-25P01717 112 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 FTLP02792 175 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 KLKB1P03952 638 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 ABCB4P21439 1286 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 CORO1AP31146 461 aaKnown RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 SCNN1AP37088 669 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 SULT1E1P49888 294 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 VCPP55072 806 aaKnown RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 GSCP56915 257 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 TRIP4Q15650 581 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 TSR1Q2NL82 804 aaKnown RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 EML3Q32P44 896 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 Q6ZNB5 142 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 C3orf20Q8ND61 904 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 DNASE1L2Q92874 299 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 IRF7Q92985 503 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 PLD4Q96BZ4 506 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 FCRL2Q96LA5 508 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 SERPINB11Q96P15 392 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 FAM83CQ9BQN1 747 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 LINC00597Q9H2U6 94 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 DEF6Q9H4E7 631 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 ARHGEF3Q9NR81 526 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 HEBP1Q9NRV9 189 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 THG1LQ9NWX6 298 aaKnown RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 DDIT4Q9NX09 232 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 CALCOCO1Q9P1Z2 691 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 TMEM59LQ9UK28 342 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 LSM7Q9UK45 103 aaKnown RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 FBXL21Q9UKT6 434 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 HBS1LQ9Y450 684 aaKnown RBP11.52□□□□□ -0.57
UBE4B-210ENST00000488228 DOCK4Q8N1I0 1966 aa11.52□□□□□ -0.57
UBE4B-210ENST00000488228 E2F8A0AVK6 867 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 AKR1B10O60218 316 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 RTN2O75298 545 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 MOCS2O96007 188 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 IGLV3-27P01718 113 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 CYP17A1P05093 508 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 GZMAP12544 262 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 MATKP42679 507 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 TBX4P57082 545 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 COG7P83436 770 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 CDK17Q00537 523 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 NME3Q13232 169 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 MAPK8IP2Q13387 824 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 PDGFRLQ15198 375 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 ASTE1Q2TB18 679 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 BEND5Q7L4P6 421 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 DENND1CQ8IV53 801 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 SIX5Q8N196 739 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 CSGALNACT1Q8TDX6 532 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 ATP2A3Q93084 1043 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 CFAP57Q96MR6 1250 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 TBCBQ99426 244 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 SELENOOQ9BVL4 669 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 PACSIN1Q9BY11 444 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 EPHX3Q9H6B9 360 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 NHEJ1Q9H9Q4 299 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 CNOT8Q9UFF9 292 aaKnown RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 PIAS3Q9Y6X2 628 aa11.51□□□□□ -0.57
UBE4B-210ENST00000488228 NYNRINQ9P2P1 1898 aaKnown RBP11.51□□□□□ -0.57
UBE4B-210ENST00000488228 SSU72P8A0A1W2PR75 194 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 KRBA1A5PL33 1030 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 FAM86C2PA6NEL3 165 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 M0QYT0 321 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 PDGFBP01127 241 aaPredicted RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 KRT3P12035 628 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ALADP13716 330 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms