RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 HOXC11O43248 304 aaPredicted RBP24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 PAPSS1O43252 624 aaPredicted RBP24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 SEC13P55735 322 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 BPIFB4P59827 614 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 MESP2Q0VG99 397 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 PPP2R5DQ14738 602 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 PLD4Q96BZ4 506 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 PNKPQ96T60 521 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 BBS2Q9BXC9 721 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 STK33Q9BYT3 514 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 DCLK3Q9C098 648 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 NLRC4Q9NPP4 1024 aa24.74■■□□□ 1.55
RHBDD3-205ENST00000488106 FAM170AA1A519 330 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 SMTNL1A8MU46 457 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 SART1O43290 800 aaKnown RBP24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 NCAM1P13591 858 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 ZNF528Q3MIS6 628 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 FBXO43Q4G163 708 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 TAF3Q5VWG9 929 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 SMYD5Q6GMV2 418 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 MSANTD2Q6P1R3 559 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 APTXQ7Z2E3 356 aaKnown RBP24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 SFTPA1Q8IWL2 248 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 WDTC1Q8N5D0 677 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 RPLP0P6Q8NHW5 317 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 CPXM1Q96SM3 734 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 PDCL3Q9H2J4 239 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 ARHGEF4Q9NR80 690 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 AGO1Q9UL18 857 aaKnown RBP24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 ZNF510Q9Y2H8 683 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 HBS1LQ9Y450 684 aaKnown RBP24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 CEP83Q9Y592 693 aa24.73■■□□□ 1.55
RHBDD3-205ENST00000488106 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 APODP05090 189 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 CYP11B1P15538 503 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 EIF2DP41214 584 aaKnown RBP24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 MRE11P49959 708 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 ZC3H14Q6PJT7 736 aaKnown RBP24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 MAMSTRQ6ZN01 415 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 TMEM110Q86TL2 294 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 ALYREFQ86V81 257 aaKnown RBP24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 ETFBKMTQ8IXQ9 262 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 NEK11Q8NG66 645 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 PIWIL1Q96J94 861 aaKnown RBP24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 PPP1R13BQ96KQ4 1090 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 NOX5Q96PH1 765 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 LHX5Q9H2C1 402 aa24.72■■□□□ 1.55
RHBDD3-205ENST00000488106 ANTXRLA6NF34 631 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 TULP3O75386 442 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 GFPT2O94808 682 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 KAT7O95251 611 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 TYRP14679 529 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 HARS2P49590 506 aaKnown RBP24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 SYNCQ9H7C4 482 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 DNAJC17Q9NVM6 304 aaKnown RBP24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 POLR3BQ9NW08 1133 aaPredicted RBP24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 PLK2Q9NYY3 685 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 MARK1Q9P0L2 795 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 NAALADL1Q9UQQ1 740 aa24.71■■□□□ 1.55
RHBDD3-205ENST00000488106 K7EQS6 105 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 CAPN9O14815 690 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 ATG13O75143 517 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 FYNP06241 537 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 TDGF1P13385 188 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 HOXC13P31276 330 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 TRIP4Q15650 581 aaPredicted RBP24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 C2orf27AQ580R0 203 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 NOP9Q86U38 636 aaKnown RBP24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 ADAM32Q8TC27 787 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 DQX1Q8TE96 717 aaKnown RBP24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 IPO4Q8TEX9 1081 aaKnown RBP24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 SPAG5Q96R06 1193 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 ERGIC2Q96RQ1 377 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 WDR35Q9P2L0 1181 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 DEC1Q9P2X7 70 aa24.7■■□□□ 1.54
RHBDD3-205ENST00000488106 SDK1Q7Z5N4 2213 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 LRRC10BA6NIK2 292 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 TRIM24O15164 1050 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 CACNG3O60359 315 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 ERBB2P04626 1255 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 JAM2P57087 298 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 PTPN20Q4JDL3 420 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 HEATR6Q6AI08 1181 aaKnown RBP24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 GRAMD4Q6IC98 578 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 FAM183BPQ6ZVS7 135 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 PHTF2Q8N3S3 785 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 EPS8L1Q8TE68 723 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 XPO6Q96QU8 1125 aaKnown RBP24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 TRIM62Q9BVG3 475 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 ZSCAN32Q9NX65 697 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 OTOGLQ3ZCN5 2332 aa24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 EP300Q09472 2414 aaPredicted RBP24.69■■□□□ 1.54
RHBDD3-205ENST00000488106 CHURC1-FNTBB4DL54 471 aa24.68■■□□□ 1.54
RHBDD3-205ENST00000488106 PROB1E7EW31 1015 aa24.68■■□□□ 1.54
RHBDD3-205ENST00000488106 K7ESF4 209 aa24.68■■□□□ 1.54
RHBDD3-205ENST00000488106 PAPSS2O95340 614 aaPredicted RBP24.68■■□□□ 1.54
RHBDD3-205ENST00000488106 SOX5P35711 763 aa24.68■■□□□ 1.54
RHBDD3-205ENST00000488106 CHKAP35790 457 aa24.68■■□□□ 1.54
RHBDD3-205ENST00000488106 GRIA2P42262 883 aa24.68■■□□□ 1.54
RHBDD3-205ENST00000488106 DMWDQ09019 674 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms