RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 PITX1P78337 314 aaPredicted RBP13.31□□□□□ -0.28
PRDM2-208ENST00000487453 COG7P83436 770 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 ZXDBP98169 803 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 NME3Q13232 169 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 SPA17Q15506 151 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 DCUN1D2Q6PH85 259 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 RIN3Q8TB24 985 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 CTNNBL1Q8WYA6 563 aaPredicted RBP13.31□□□□□ -0.28
PRDM2-208ENST00000487453 KHSRPQ92945 711 aaKnown RBP eCLIP13.31□□□□□ -0.283e-8■□□□□ 9.5
PRDM2-208ENST00000487453 CFAP57Q96MR6 1250 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 TRMT61BQ9BVS5 477 aaKnown RBP13.31□□□□□ -0.28
PRDM2-208ENST00000487453 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
PRDM2-208ENST00000487453 THG1LQ9NWX6 298 aaKnown RBP13.31□□□□□ -0.28
PRDM2-208ENST00000487453 DDIT4Q9NX09 232 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 TMEM59LQ9UK28 342 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 WNT6Q9Y6F9 365 aa13.31□□□□□ -0.28
PRDM2-208ENST00000487453 M0QYT0 321 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 ZNF263O14978 683 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 IRAK2O43187 625 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 STC2O76061 302 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
PRDM2-208ENST00000487453 PTMAP06454 111 aaKnown RBP13.3□□□□□ -0.28
PRDM2-208ENST00000487453 H2AFZP0C0S5 128 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 DESP17661 470 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 GPD1P21695 349 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 FECHP22830 423 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 GDI1P31150 447 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 SDC4P31431 198 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 GBP1P32455 592 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 RFC1P35251 1148 aaPredicted RBP13.3□□□□□ -0.28
PRDM2-208ENST00000487453 IFNAR2P48551 515 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 GALCP54803 685 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 TBX4P57082 545 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 TDGQ13569 410 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 TRIP4Q15650 581 aaPredicted RBP13.3□□□□□ -0.28
PRDM2-208ENST00000487453 CDO1Q16878 200 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 TRNP1Q6NT89 227 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 H2AFVQ71UI9 128 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 MFSD6LQ8IWD5 586 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 SLC44A3Q8N4M1 653 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 RNF34Q969K3 372 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 PLD4Q96BZ4 506 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 ZFYVE19Q96K21 471 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 LRRC3BQ96PB8 259 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 TBCBQ99426 244 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 PACSIN1Q9BY11 444 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 BRD9Q9H8M2 597 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 MRPL47Q9HD33 250 aaKnown RBP13.3□□□□□ -0.28
PRDM2-208ENST00000487453 CD320Q9NPF0 282 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 LUC7LQ9NQ29 371 aaKnown RBP13.3□□□□□ -0.28
PRDM2-208ENST00000487453 MUTYHQ9UIF7 546 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 NENFQ9UMX5 172 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 SORCS3Q9UPU3 1222 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 HBS1LQ9Y450 684 aaKnown RBP13.3□□□□□ -0.28
PRDM2-208ENST00000487453 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
PRDM2-208ENST00000487453 SPTBN5Q9NRC6 3674 aaKnown RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 COL4A3Q01955 1670 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 TCRBV5S1A1TA0A578 114 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 E2F8A0AVK6 867 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 SIGLEC16A6NMB1 481 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 NARSO43776 548 aaKnown RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 NDUFA10O95299 355 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 APOEP02649 317 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 TCF3P15923 654 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 PDGFRAP16234 1089 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 TFE3P19532 575 aaPredicted RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 CORO1AP31146 461 aaKnown RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 HARS2P49590 506 aaKnown RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 GPC5P78333 572 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 ATP11AP98196 1134 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 DEUP1Q05D60 604 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 FCHO2Q0JRZ9 810 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 MAMLD1Q13495 774 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 SLC25A52Q3SY17 297 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 PLEKHA7Q6IQ23 1121 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 SND1Q7KZF4 910 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 ARCQ7LC44 396 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 RXFP2Q8WXD0 754 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 WBP2Q969T9 261 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 ARHGEF26Q96DR7 871 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 NPY6RQ99463 290 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
PRDM2-208ENST00000487453 RRN3Q9NYV6 651 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 TLR6Q9Y2C9 796 aa13.29□□□□□ -0.28
PRDM2-208ENST00000487453 COL4A2P08572 1712 aa13.28□□□□□ -0.28
PRDM2-208ENST00000487453 C2CD4BA6NLJ0 364 aa13.28□□□□□ -0.28
PRDM2-208ENST00000487453 EIF3CLB5ME19 914 aaKnown RBP13.28□□□□□ -0.28
PRDM2-208ENST00000487453 NRDCO43847 1150 aa13.28□□□□□ -0.28
PRDM2-208ENST00000487453 MOCS2O96007 188 aaPredicted RBP13.28□□□□□ -0.28
PRDM2-208ENST00000487453 IGLV3-25P01717 112 aa13.28□□□□□ -0.28
PRDM2-208ENST00000487453 TMEM253P0C7T8 217 aa13.28□□□□□ -0.28
PRDM2-208ENST00000487453 SRFP11831 508 aa13.28□□□□□ -0.28
PRDM2-208ENST00000487453 RDXP35241 583 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms