RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 ANKS3Q6ZW76 656 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 SLC24A5Q71RS6 500 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 SPATA21Q7Z572 469 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 SNX19Q92543 992 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 MYLPFQ96A32 169 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 DDX20Q9UHI6 824 aaKnown RBP13.95□□□□□ -0.18
PKD1-219ENST00000486339 PTCH2Q9Y6C5 1203 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 TCHHQ07283 1943 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 RENBPP51606 427 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 RPL7AP62424 266 aaKnown RBP13.95□□□□□ -0.18
PKD1-219ENST00000486339 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 PALB2Q86YC2 1186 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 C1orf127Q8N9H9 656 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
PKD1-219ENST00000486339 VPS9D1Q9Y2B5 631 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 NCANO14594 1321 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 ARIH2O95376 493 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 C4BPAP04003 597 aaKnown RBP13.95□□□□□ -0.18
PKD1-219ENST00000486339 SELPP16109 830 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 ZNF135P52742 658 aaPredicted RBP13.95□□□□□ -0.18
PKD1-219ENST00000486339 ARHGAP1Q07960 439 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 CHST7Q9NS84 486 aa13.95□□□□□ -0.18
PKD1-219ENST00000486339 CCDC22O60826 627 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 MAP4P27816 1152 aaKnown RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 SCNN1BP51168 640 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 PPP1R26Q5T8A7 1209 aaPredicted RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 EPS8L3Q8TE67 593 aaKnown RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 FOPNLQ96NB1 174 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 FICDQ9BVA6 458 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 EML4Q9HC35 981 aaKnown RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 ATP13A1Q9HD20 1204 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 DMAC2Q9NW81 257 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 COL16A1Q07092 1604 aaPredicted RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 OPHN1O60890 802 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 INHAP05111 366 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 SERPINF2P08697 491 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 WEE1P30291 646 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 HADHAP40939 763 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 CCDC15Q0P6D6 951 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 PABPC1LQ4VXU2 614 aaKnown RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 LVRNQ6Q4G3 990 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 HDAC7Q8WUI4 952 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 Q9H521 79 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 ANKZF1Q9H8Y5 726 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 KCND1Q9NSA2 647 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 TMEM51Q9NW97 253 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 MARCOQ9UEW3 520 aaPredicted RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 VANGL2Q9ULK5 521 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 DNALI1O14645 258 aaPredicted RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 RHOBTB1O94844 696 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 ESRRBO95718 433 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 KRT4P19013 534 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 PPM1LQ5SGD2 360 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 ANGPTL8Q6UXH0 198 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 MFN1Q8IWA4 741 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 MRPL45Q9BRJ2 306 aaKnown RBP13.94□□□□□ -0.18
PKD1-219ENST00000486339 BRD8Q9H0E9 1235 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
PKD1-219ENST00000486339 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 BTNL10A8MVZ5 291 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 NT5C1B-RDH14C9J2C7 533 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 GNGT2O14610 69 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 XYLBO75191 536 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
PKD1-219ENST00000486339 MYL2P10916 166 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 KCNA3P22001 575 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 ATP5C1P36542 298 aaKnown RBP13.93□□□□□ -0.18
PKD1-219ENST00000486339 PRMT2P55345 433 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 SP2Q02086 613 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 TRIM68Q6AZZ1 485 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 LGI2Q8N0V4 545 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 CCT8L2Q96SF2 557 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 EIF2AQ9BY44 585 aaKnown RBP13.93□□□□□ -0.18
PKD1-219ENST00000486339 SLC25A13Q9UJS0 675 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 KIF3CO14782 793 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 TSPAN3O60637 253 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 LBRQ14739 615 aaKnown RBP13.93□□□□□ -0.18
PKD1-219ENST00000486339 RBBP7Q16576 425 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 ZNF662Q6ZS27 426 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 FAM35AQ86V20 835 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 HIPK4Q8NE63 616 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 OR12D3Q9UGF7 316 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 RNF103O00237 685 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 CLDN5O00501 218 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 TOMM70O94826 608 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 CKBP12277 381 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 CLNS1AP54105 237 aaKnown RBP13.93□□□□□ -0.18
PKD1-219ENST00000486339 ATP13A4Q4VNC1 1196 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 ZC3H12AQ5D1E8 599 aaKnown RBP13.93□□□□□ -0.18
PKD1-219ENST00000486339 SNRNP25Q9BV90 132 aaKnown RBP13.93□□□□□ -0.18
PKD1-219ENST00000486339 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.93□□□□□ -0.183e-8■■■■■ 46.9
PKD1-219ENST00000486339 EPN3Q9H201 632 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 FZD8Q9H461 694 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 BCAS3Q9H6U6 928 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 ARL2BPQ9Y2Y0 163 aa13.93□□□□□ -0.18
PKD1-219ENST00000486339 CASQ2O14958 399 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms