RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CSRP2Q16527 193 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 RSPO4Q2I0M5 234 aaPredicted RBP19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 USP39Q53GS9 565 aaKnown RBP19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 C10orf76Q5T2E6 689 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 ANO7Q6IWH7 933 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 TRMT11Q7Z4G4 463 aaKnown RBP19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 ZNF513Q8N8E2 541 aaPredicted RBP19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 RNF139Q8WU17 664 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 PLD4Q96BZ4 506 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 POLMQ9NP87 494 aaPredicted RBP19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 DLL3Q9NYJ7 618 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 FBXO10Q9UK96 956 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 ATG2BQ96BY7 2078 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 ADAM23O75077 832 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 SDHBP21912 280 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 DGKGP49619 791 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 MFAP3P55082 362 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 TRIP4Q15650 581 aaPredicted RBP19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 PLK5Q496M5 336 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 ENOSF1Q7L5Y1 443 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 ERMP1Q7Z2K6 904 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 DENND1CQ8IV53 801 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 FMNL3Q8IVF7 1028 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 IRGQQ8WZA9 623 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 EDEM1Q92611 657 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 FAM81BQ96LP2 452 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 CRACR2AQ9BSW2 395 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 TPSD1Q9BZJ3 242 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 DUSP15Q9H1R2 295 aaPredicted RBP19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 ZDHHC4Q9NPG8 344 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 PLK2Q9NYY3 685 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 HCN2Q9UL51 889 aa19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 HBS1LQ9Y450 684 aaKnown RBP19.26■□□□□ 0.67
PRPF40A-209ENST00000486100 DCLK1O15075 740 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 RHOBTB1O94844 696 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 EPN2O95208 641 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 PENKP01210 267 aaPredicted RBP19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 KRT5P13647 590 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 SLC9A1P19634 815 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 FOXK2Q01167 660 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 TPD52L1Q16890 204 aaPredicted RBP19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 FYB2Q5VWT5 728 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 TRIM65Q6PJ69 517 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 GBP6Q6ZN66 633 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 TOGARAM2Q6ZUX3 1019 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 CPXM2Q8N436 756 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 MDGA1Q8NFP4 955 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 BHMTQ93088 406 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 P2RY11Q96G91 374 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 ARRDC1-AS1Q9H2J1 176 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 THAP9Q9H5L6 903 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 SFMBT1Q9UHJ3 866 aa19.25■□□□□ 0.67
PRPF40A-209ENST00000486100 GTPBP10A4D1E9 387 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 PRRT4C9JH25 899 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 PIK3R2O00459 728 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 FOXD2O60548 495 aaPredicted RBP19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 FBXO21O94952 628 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 ERCC5P28715 1186 aaPredicted RBP19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 NTSR1P30989 418 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 GPD2P43304 727 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 MTIF2P46199 727 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 RPL34P49207 117 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 HARS2P49590 506 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 ELF2Q15723 593 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 C11orf74Q86VG3 221 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 FAM217AQ8IXS0 508 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 OLIG1Q8TAK6 271 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 INVSQ9Y283 1065 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 SLC27A6Q9Y2P4 619 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 PCDHGA5Q9Y5G8 931 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 MYO16Q9Y6X6 1858 aa19.24■□□□□ 0.67
PRPF40A-209ENST00000486100 MYOFQ9NZM1 2061 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 MED7O43513 233 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 CYBBP04839 570 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 MEA1Q16626 185 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 EXOC3L4Q17RC7 722 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 SDE2Q6IQ49 451 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 GJB7Q6PEY0 223 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 PRR23CQ6ZRP0 262 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 LMBRD1Q9NUN5 540 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 DACH1Q9UI36 760 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 SPTBN4Q9H254 2564 aa19.23■□□□□ 0.67
PRPF40A-209ENST00000486100 LETM1O95202 739 aaPredicted RBP19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 LTFP02788 710 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 ZNF806P0C7X5 589 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 PON1P27169 355 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 GBP1P32455 592 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 ACADSBP45954 432 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 DPCR1Q3MIW9 517 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 EGFLAMQ63HQ2 1017 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 SMYD5Q6GMV2 418 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 MSANTD2Q6P1R3 559 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 DGLUCYQ7Z3D6 616 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 FAM114A1Q8IWE2 563 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 CLEC4CQ8WTT0 213 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 STK32AQ8WU08 396 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 GOLGA1Q92805 767 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms