RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 A0A1W2PQH9 124 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 CILPO75339 1184 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 TBX18O95935 607 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
UBA3-210ENST00000485424 CEACAM1P13688 526 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 HOXB2P14652 356 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 TYRP14679 529 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 SPINK2P20155 84 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 PTGER3P43115 390 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 BECN1Q14457 450 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 MAP7D1Q3KQU3 841 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 UAP1L1Q3KQV9 507 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 PPP1R26Q5T8A7 1209 aaPredicted RBP13.94□□□□□ -0.18
UBA3-210ENST00000485424 HTR3DQ70Z44 454 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 GPRIN1Q7Z2K8 1008 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 KLF16Q9BXK1 252 aaPredicted RBP13.94□□□□□ -0.18
UBA3-210ENST00000485424 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
UBA3-210ENST00000485424 DUSP16Q9BY84 665 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 GOLPH3LQ9H4A5 285 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 TMEM74BQ9NUR3 256 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 RASAL2Q9UJF2 1139 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 NUDT5Q9UKK9 219 aa13.94□□□□□ -0.18
UBA3-210ENST00000485424 RALYQ9UKM9 306 aaKnown RBP13.94□□□□□ -0.18
UBA3-210ENST00000485424 ACACAQ13085 2346 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 SMC2O95347 1197 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 NTSR1P30989 418 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 DPP6P42658 865 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 DGKGP49619 791 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 YWHAEP62258 255 aaKnown RBP13.93□□□□□ -0.18
UBA3-210ENST00000485424 LMAN2Q12907 356 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 PNOCQ13519 176 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
UBA3-210ENST00000485424 MIB1Q86YT6 1006 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 SYT12Q8IV01 421 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
UBA3-210ENST00000485424 CHPFQ8IZ52 775 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 ARHGAP18Q8N392 663 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 DEFB124Q8NES8 71 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 WBP2Q969T9 261 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 TMEM176AQ96HP8 235 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 FAXDC2Q96IV6 333 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 NUSAP1Q9BXS6 441 aaKnown RBP13.93□□□□□ -0.18
UBA3-210ENST00000485424 ADAM33Q9BZ11 813 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 RAB20Q9NX57 234 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 ZNF510Q9Y2H8 683 aa13.93□□□□□ -0.18
UBA3-210ENST00000485424 LOC400499M0QZD8 3231 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 HHLA1C9JL84 531 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 MDM4O15151 490 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 AP5Z1O43299 807 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 ENGP17813 658 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 CHKAP35790 457 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 WASP42768 502 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 MAPK8P45983 427 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 KIF11P52732 1056 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 COG7P83436 770 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 STIM1Q13586 685 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 ZNF658Q5TYW1 1059 aaPredicted RBP13.92□□□□□ -0.18
UBA3-210ENST00000485424 PEAR1Q5VY43 1037 aaPredicted RBP13.92□□□□□ -0.18
UBA3-210ENST00000485424 LYSMD4Q5XG99 296 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 KLHDC10Q6PID8 442 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 BHMTQ93088 406 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 SMARCE1Q969G3 411 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 EEF2KMTQ96G04 330 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 GTPBP4Q9BZE4 634 aaKnown RBP13.92□□□□□ -0.18
UBA3-210ENST00000485424 NMUR1Q9HB89 426 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBA3-210ENST00000485424 HESX1Q9UBX0 185 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 HCN2Q9UL51 889 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 ZMIZ1Q9ULJ6 1067 aa13.92□□□□□ -0.18
UBA3-210ENST00000485424 GOLGA4Q13439 2230 aaKnown RBP13.92□□□□□ -0.18
UBA3-210ENST00000485424 TRIM24O15164 1050 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 CACNG3O60359 315 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 CYBBP04839 570 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 HMBSP08397 361 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 GABRG2P18507 467 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 ITPKAP23677 461 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 PRCPP42785 496 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 PGFP49763 221 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 FKBP3Q00688 224 aaKnown RBP13.91□□□□□ -0.18
UBA3-210ENST00000485424 EFEMP1Q12805 493 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 ZCWPW2Q504Y3 356 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 SPDYCQ5MJ68 293 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 UCMAQ8WVF2 138 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 GATA6Q92908 595 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 GSDMAQ96QA5 445 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 SCNM1Q9BWG6 230 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 DCLK3Q9C098 648 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 FAM124BQ9H5Z6 455 aaPredicted RBP13.91□□□□□ -0.18
UBA3-210ENST00000485424 OSER1Q9NX31 292 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 CALCOCO1Q9P1Z2 691 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 PILRBQ9UKJ0 227 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 MYLKQ15746 1914 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 IGSF10Q6WRI0 2623 aa13.91□□□□□ -0.18
UBA3-210ENST00000485424 CELSR3Q9NYQ7 3312 aa13.9□□□□□ -0.18
UBA3-210ENST00000485424 FASNP49327 2511 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms