RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TCERG1LQ5VWI1 586 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 ARHGAP17Q68EM7 881 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 ANKRD52Q8NB46 1076 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 CCDC150Q8NCX0 1101 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 IPO4Q8TEX9 1081 aaKnown RBP18.92■□□□□ 0.62
ATG4B-221ENST00000483778 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
ATG4B-221ENST00000483778 CLIC5Q9NZA1 410 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 COQ4Q9Y3A0 265 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 NUMA1Q14980 2115 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 NDUFV2P19404 249 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 CORO1AP31146 461 aaKnown RBP18.91■□□□□ 0.62
ATG4B-221ENST00000483778 PDE4CQ08493 712 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 LRMPQ12912 555 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 TRIM61Q5EBN2 209 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 DCAF17Q5H9S7 520 aaPredicted RBP18.91■□□□□ 0.62
ATG4B-221ENST00000483778 FYB2Q5VWT5 728 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 CHPFQ8IZ52 775 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 SPATA20Q8TB22 786 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 UBA3Q8TBC4 463 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 ULBP1Q9BZM6 244 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 UBXN6Q9BZV1 441 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 TMEM9BQ9NQ34 198 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 PILRBQ9UKJ0 227 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 AGO1Q9UL18 857 aaKnown RBP18.91■□□□□ 0.62
ATG4B-221ENST00000483778 PCDH15Q96QU1 1955 aa18.91■□□□□ 0.62
ATG4B-221ENST00000483778 AKAP13Q12802 2813 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 CKAP5Q14008 2032 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 IGHV1OR15-9A0A0B4J2B8 117 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 TOP3BO95985 862 aaKnown RBP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 PENKP01210 267 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 RALAP11233 206 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 CD44P16070 742 aaKnown RBP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 TRIM21P19474 475 aaKnown RBP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 PSEN1P49768 467 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 NOVA1P51513 510 aaKnown RBP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 TKTL1P51854 596 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 YWHAGP61981 247 aaKnown RBP eCLIP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 GOLGA8FQ08AF8 430 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 GOLGA8DPQ0D2H9 430 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 GEN1Q17RS7 908 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 GOLGA7BQ2TAP0 167 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 UAP1L1Q3KQV9 507 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 PREPLQ4J6C6 727 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 SH3PXD2AQ5TCZ1 1133 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 PM20D1Q6GTS8 502 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 TRMT11Q7Z4G4 463 aaKnown RBP18.9■□□□□ 0.62
ATG4B-221ENST00000483778 SYT12Q8IV01 421 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 DENND1CQ8IV53 801 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 SLC41A1Q8IVJ1 513 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 UBR7Q8N806 425 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 SPACA7Q96KW9 195 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 GABRG3Q99928 467 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 MARCH2Q9P0N8 246 aa18.9■□□□□ 0.62
ATG4B-221ENST00000483778 KNL1Q8NG31 2342 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 SLC12A8A0AV02 714 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 RPL6Q02878 288 aaKnown RBP18.89■□□□□ 0.61
ATG4B-221ENST00000483778 CUL2Q13617 745 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 COBLL1Q53SF7 1204 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 NUDT18Q6ZVK8 323 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 TFAP2BQ92481 460 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 SLC35C1Q96A29 364 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 FAXDC2Q96IV6 333 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 MRGPRX1Q96LB2 322 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 GSDMAQ96QA5 445 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 ZSWIM1Q9BR11 485 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 EVLQ9UI08 416 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-221ENST00000483778 CYP8B1Q9UNU6 501 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 STON1Q9Y6Q2 735 aa18.89■□□□□ 0.61
ATG4B-221ENST00000483778 RNF225M0QZC1 329 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-221ENST00000483778 STX10O60499 249 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 ZBED1O96006 694 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 MAPK8P45983 427 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 MFAP3P55082 362 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 COG7P83436 770 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 FKBP3Q00688 224 aaKnown RBP18.88■□□□□ 0.61
ATG4B-221ENST00000483778 LYSMD4Q5XG99 296 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 TMEM215Q68D42 235 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 OR2I1PQ8NGU4 316 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 SORCS1Q8WY21 1168 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 EDEM1Q92611 657 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 KAT5Q92993 513 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 PIWIL1Q96J94 861 aaKnown RBP18.88■□□□□ 0.61
ATG4B-221ENST00000483778 TSPAN16Q9UKR8 245 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 ANGPTL2Q9UKU9 493 aa18.88■□□□□ 0.61
ATG4B-221ENST00000483778 YJEFN3A6XGL0 299 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 E7ENQ6 273 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 SLC16A3O15427 465 aaKnown RBP18.87■□□□□ 0.61
ATG4B-221ENST00000483778 ENGP17813 658 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 SPINK2P20155 84 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 BMP6P22004 513 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 SHC2P98077 582 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 BYSLQ13895 437 aaKnown RBP18.87■□□□□ 0.61
ATG4B-221ENST00000483778 DAB2IPQ5VWQ8 1189 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 SDE2Q6IQ49 451 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 SLC23A3Q6PIS1 610 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 RSRC2Q7L4I2 434 aaKnown RBP18.87■□□□□ 0.61
ATG4B-221ENST00000483778 RBBP8NLQ8NC74 664 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-221ENST00000483778 DEFB124Q8NES8 71 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 SMARCE1Q969G3 411 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms