RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
RPP40-206ENST00000483546 AGPAT1Q99943 283 aa16.3■□□□□ 0.2
RPP40-206ENST00000483546 IER2Q9BTL4 223 aa16.3■□□□□ 0.2
RPP40-206ENST00000483546 KCNH6Q9H252 994 aa16.3■□□□□ 0.2
RPP40-206ENST00000483546 LINC00597Q9H2U6 94 aa16.3■□□□□ 0.2
RPP40-206ENST00000483546 RRN3Q9NYV6 651 aa16.3■□□□□ 0.2
RPP40-206ENST00000483546 COL4A3Q01955 1670 aa16.3■□□□□ 0.2
RPP40-206ENST00000483546 SHISA7A6NL88 538 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 TRDMT1O14717 391 aaKnown RBP16.29■□□□□ 0.2
RPP40-206ENST00000483546 FYNP06241 537 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 UNGP13051 313 aaPredicted RBP16.29■□□□□ 0.2
RPP40-206ENST00000483546 GJA4P35212 333 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 EIF2DP41214 584 aaKnown RBP16.29■□□□□ 0.2
RPP40-206ENST00000483546 RPS9P46781 194 aaKnown RBP16.29■□□□□ 0.2
RPP40-206ENST00000483546 HARS2P49590 506 aaKnown RBP16.29■□□□□ 0.2
RPP40-206ENST00000483546 CENPCQ03188 943 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 GAD2Q05329 585 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 LRRC32Q14392 662 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 UBXN2BQ14CS0 331 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 DHCR24Q15392 516 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 NAA35Q5VZE5 725 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 NUGGCQ68CJ6 796 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 SARM1Q6SZW1 724 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 FAM183BPQ6ZVS7 135 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 ARCQ7LC44 396 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 UNC45BQ8IWX7 931 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 BBS7Q8IWZ6 715 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 SLC2A13Q96QE2 648 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 IRX2Q9BZI1 471 aaPredicted RBP16.29■□□□□ 0.2
RPP40-206ENST00000483546 WDR35Q9P2L0 1181 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
RPP40-206ENST00000483546 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
RPP40-206ENST00000483546 MYOFQ9NZM1 2061 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 OTOL1A6NHN0 477 aaPredicted RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 FAM170BA6NMN3 283 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 DAB1O75553 588 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 IGLV3-27P01718 113 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 CYP17A1P05093 508 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 MMP8P22894 467 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 TARSP26639 723 aaKnown RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 CORO1AP31146 461 aaKnown RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 NSFP46459 744 aaKnown RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 GSCP56915 257 aaPredicted RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 ZBED6P86452 979 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 MTA1Q13330 715 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 DGKKQ5KSL6 1271 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 SPECC1LQ69YQ0 1117 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 XYLT1Q86Y38 959 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 CCDC105Q8IYK2 499 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 SYNPOQ8N3V7 929 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 CPXM2Q8N436 756 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 CCDC26Q8TAB7 109 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 DQX1Q8TE96 717 aaKnown RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 AZIN2Q96A70 460 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 CLDN23Q96B33 292 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 FOXQ1Q9C009 403 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 SPHK2Q9NRA0 654 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 MARK1Q9P0L2 795 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 TJP2Q9UDY2 1190 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 SFMBT1Q9UHJ3 866 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 NAALADL1Q9UQQ1 740 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 TLR6Q9Y2C9 796 aa16.28■□□□□ 0.2
RPP40-206ENST00000483546 LUC7L2Q9Y383 392 aaKnown RBP16.28■□□□□ 0.2
RPP40-206ENST00000483546 KIAA1549LQ6ZVL6 1849 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.27■□□□□ 0.2
RPP40-206ENST00000483546 HOXC11O43248 304 aaPredicted RBP16.27■□□□□ 0.2
RPP40-206ENST00000483546 CALB1P05937 261 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 ADH5P11766 374 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 DRD1P21728 446 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 GBP1P32455 592 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 NOS2P35228 1153 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 SOX9P48436 509 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 TBX4P57082 545 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 CDK17Q00537 523 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 GRSF1Q12849 480 aaKnown RBP eCLIP16.27■□□□□ 0.2
RPP40-206ENST00000483546 CLEC16AQ2KHT3 1053 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 TMEM196Q5HYL7 178 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 RHBDF2Q6PJF5 856 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 FAM217AQ8IXS0 508 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 ZNF687Q8N1G0 1237 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 TMEM105Q8N8V8 129 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 TTC8Q8TAM2 541 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 CPA5Q8WXQ8 436 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 CD101Q93033 1021 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 WBP2Q969T9 261 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 P2RY13Q9BPV8 354 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 SYT11Q9BT88 431 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 STOML2Q9UJZ1 356 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 STAP1Q9ULZ2 295 aa16.27■□□□□ 0.2
RPP40-206ENST00000483546 IRAK2O43187 625 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 TRUB2O95900 331 aaKnown RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 IGLV3-25P01717 112 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 KLKB1P03952 638 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 HMBSP08397 361 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 TPM1P09493 284 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 SLC2A3P11169 496 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 TNFAIP3P21580 790 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 CD72P21854 359 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms