RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 Q6ZNB5 142 aa21.83■■□□□ 1.09
SEC13-217ENST00000482647 NUCKS1Q9H1E3 243 aaKnown RBP21.83■■□□□ 1.09
SEC13-217ENST00000482647 SEPT11Q9NVA2 429 aaKnown RBP21.83■■□□□ 1.09
SEC13-217ENST00000482647 F5P12259 2224 aa21.83■■□□□ 1.08
SEC13-217ENST00000482647 KLKB1P03952 638 aa21.82■■□□□ 1.08
SEC13-217ENST00000482647 CYP17A1P05093 508 aa21.82■■□□□ 1.08
SEC13-217ENST00000482647 TARSP26639 723 aaKnown RBP21.82■■□□□ 1.08
SEC13-217ENST00000482647 CORO1AP31146 461 aaKnown RBP21.82■■□□□ 1.08
SEC13-217ENST00000482647 TRIP4Q15650 581 aaPredicted RBP21.82■■□□□ 1.08
SEC13-217ENST00000482647 SYPL2Q5VXT5 272 aa21.82■■□□□ 1.08
SEC13-217ENST00000482647 DENND1CQ8IV53 801 aa21.82■■□□□ 1.08
SEC13-217ENST00000482647 CCDC105Q8IYK2 499 aa21.82■■□□□ 1.08
SEC13-217ENST00000482647 DQX1Q8TE96 717 aaKnown RBP21.82■■□□□ 1.08
SEC13-217ENST00000482647 PIWIL1Q96J94 861 aaKnown RBP21.82■■□□□ 1.08
SEC13-217ENST00000482647 PCDHB18PQ96TA0 734 aa21.82■■□□□ 1.08
SEC13-217ENST00000482647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.82■■□□□ 1.08
SEC13-217ENST00000482647 ITIH6Q6UXX5 1313 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 TRDMT1O14717 391 aaKnown RBP21.81■■□□□ 1.08
SEC13-217ENST00000482647 MSI1O43347 362 aaKnown RBP21.81■■□□□ 1.08
SEC13-217ENST00000482647 DCNP07585 359 aaKnown RBP21.81■■□□□ 1.08
SEC13-217ENST00000482647 UNGP13051 313 aaPredicted RBP21.81■■□□□ 1.08
SEC13-217ENST00000482647 MMP8P22894 467 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 NSFP46459 744 aaKnown RBP21.81■■□□□ 1.08
SEC13-217ENST00000482647 NUBP1P53384 320 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 GAD2Q05329 585 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 PON2Q15165 354 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 CLEC16AQ2KHT3 1053 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 DCAF6Q58WW2 860 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 LY6G5CQ5SRR4 150 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 SLC26A9Q7LBE3 791 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 ZNF687Q8N1G0 1237 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 CPLX3Q8WVH0 158 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 SERPINB11Q96P15 392 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 SLC2A13Q96QE2 648 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 P2RY13Q9BPV8 354 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 SPHK2Q9NRA0 654 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 AGO1Q9UL18 857 aaKnown RBP21.81■■□□□ 1.08
SEC13-217ENST00000482647 CAPN11Q9UMQ6 739 aa21.81■■□□□ 1.08
SEC13-217ENST00000482647 FAM170AA1A519 330 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 GRAP2O75791 330 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 ADH5P11766 374 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 TNFAIP3P21580 790 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 CHKAP35790 457 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 SCNN1AP37088 669 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 GALK1P51570 392 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 TBX4P57082 545 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 ZBED6P86452 979 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 CDK17Q00537 523 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 RING1Q06587 406 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 GRSF1Q12849 480 aaKnown RBP eCLIP21.8■■□□□ 1.08
SEC13-217ENST00000482647 LRRC32Q14392 662 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 NUGGCQ68CJ6 796 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 MMS22LQ6ZRQ5 1243 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 XYLT1Q86Y38 959 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 TMEM25Q86YD3 366 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 UNC45BQ8IWX7 931 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 DEFB106AQ8N104 65 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 SLC30A5Q8TAD4 765 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 SYN2Q92777 582 aaPredicted RBP21.8■■□□□ 1.08
SEC13-217ENST00000482647 CLDN23Q96B33 292 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 CHFRQ96EP1 664 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 ANP32EQ9BTT0 268 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 LMAN1LQ9HAT1 526 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 WDR35Q9P2L0 1181 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 TLR6Q9Y2C9 796 aa21.8■■□□□ 1.08
SEC13-217ENST00000482647 LUC7L2Q9Y383 392 aaKnown RBP21.8■■□□□ 1.08
SEC13-217ENST00000482647 HELZP42694 1942 aaKnown RBP21.79■■□□□ 1.08
SEC13-217ENST00000482647 TICRRQ7Z2Z1 1910 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 PRKCIP41743 596 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 MAGEA9P43362 315 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 RPS9P46781 194 aaKnown RBP21.79■■□□□ 1.08
SEC13-217ENST00000482647 CENPCQ03188 943 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 KLHL30Q0D2K2 578 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 NNTQ13423 1086 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 FZD5Q13467 585 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 ANO4Q32M45 955 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 C2CD6Q53TS8 623 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 TMEM196Q5HYL7 178 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 DGKKQ5KSL6 1271 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 SPECC1LQ69YQ0 1117 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 ADAM32Q8TC27 787 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 CD101Q93033 1021 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 HAUS4Q9H6D7 363 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 DLGAP2Q9P1A6 1054 aa21.79■■□□□ 1.08
SEC13-217ENST00000482647 HOXC11O43248 304 aaPredicted RBP21.78■■□□□ 1.08
SEC13-217ENST00000482647 DAB1O75553 588 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 LATS1O95835 1130 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 TRUB2O95900 331 aaKnown RBP21.78■■□□□ 1.08
SEC13-217ENST00000482647 IGLV3-27P01718 113 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 CHRNB1P11230 501 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 DRD1P21728 446 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 GBP1P32455 592 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 SLC11A2P49281 568 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 RNASE9P60153 205 aaKnown RBP21.78■■□□□ 1.08
SEC13-217ENST00000482647 FAM102AQ5T9C2 384 aaPredicted RBP21.78■■□□□ 1.08
SEC13-217ENST00000482647 PPP1R2P3Q6NXS1 205 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 TAC4Q86UU9 113 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 PHF13Q86YI8 300 aaPredicted RBP21.78■■□□□ 1.08
SEC13-217ENST00000482647 PRRX2Q99811 253 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 RBSNQ9H1K0 784 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms