RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CCDC110Q8TBZ0 833 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 NMUR2Q9GZQ4 415 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 CXCL16Q9H2A7 254 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 VRTNQ9H8Y1 702 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 PCDH18Q9HCL0 1135 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 TAS2R1Q9NYW7 299 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 PAK5Q9P286 719 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 ZC3H7BQ9UGR2 993 aaKnown RBP15.43■□□□□ 0.06
ATG4B-220ENST00000482507 MTO1Q9Y2Z2 717 aaKnown RBP15.43■□□□□ 0.06
ATG4B-220ENST00000482507 HMX2A2RU54 273 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 E7ENQ6 273 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 C22orf31O95567 290 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 CSH1P0DML2 217 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 CSH2P0DML3 217 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 NEFHP12036 1026 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 CBLBQ13191 982 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 KRT81Q14533 505 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 TTC39BQ5VTQ0 682 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 TRMT10BQ6PF06 316 aaKnown RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 APBB1IPQ7Z5R6 666 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.42■□□□□ 0.067e-6■■■□□ 16.3
ATG4B-220ENST00000482507 MPP5Q8N3R9 675 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 CCDC33Q8N5R6 958 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 ZNF296Q8WUU4 475 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 OXNAD1Q96HP4 312 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 CYP3A43Q9HB55 503 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 ETNK2Q9NVF9 386 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 EVPLQ92817 2033 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 A0A087WZ62 844 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 FCHO1O14526 889 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 COPEO14579 308 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 UPP2O95045 317 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 APRTP07741 180 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 PRKCHP24723 683 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 ZBTB16Q05516 673 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 INCA1Q0VD86 236 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 KPNB1Q14974 876 aaKnown RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 ACSBG2Q5FVE4 666 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 PMF1Q6P1K2 205 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 LCLAT1Q6UWP7 414 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 ZNF534Q76KX8 674 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 TRPV1Q8NER1 839 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 FBXO27Q8NI29 283 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 WDR60Q8WVS4 1066 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 FDXACB1Q9BRP7 624 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 SNRNP25Q9BV90 132 aaKnown RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 NGRNQ9NPE2 291 aaKnown RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 BARX2Q9UMQ3 279 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-220ENST00000482507 PLLPQ9Y342 182 aa15.42■□□□□ 0.06
ATG4B-220ENST00000482507 KAT6AQ92794 2004 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 RBM47A0AV96 593 aaKnown RBP15.41■□□□□ 0.06
ATG4B-220ENST00000482507 HNRNPCL1O60812 293 aaKnown RBP15.41■□□□□ 0.06
ATG4B-220ENST00000482507 SPAG6O75602 509 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 KRT36O76013 467 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 METTL18O95568 372 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 TOP3BO95985 862 aaKnown RBP15.41■□□□□ 0.06
ATG4B-220ENST00000482507 IL1BP01584 269 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 ZNF286BP0CG31 522 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 BST1Q10588 318 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 SLC9A4Q6AI14 798 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 ANO7Q6IWH7 933 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 OLFML1Q6UWY5 402 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 TREML1Q86YW5 311 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 ARMC2Q8NEN0 867 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 SH3TC2Q8TF17 1288 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 FAM172AQ8WUF8 416 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 NRG4Q8WWG1 115 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 SLC13A1Q9BZW2 595 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 C20orf27Q9GZN8 174 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 RPL26L1Q9UNX3 145 aaKnown RBP15.41■□□□□ 0.06
ATG4B-220ENST00000482507 NME7Q9Y5B8 376 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 PLXNA1Q9UIW2 1896 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 CCDC195A0A1B0GUA6 201 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 KLF11O14901 512 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 GYG2O15488 501 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 SNRPAP09012 282 aaKnown RBP15.41■□□□□ 0.06
ATG4B-220ENST00000482507 ATICP31939 592 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 GRIA1P42261 906 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 CPA2P48052 419 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 BCAR1P56945 870 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 GOLGA7BQ2TAP0 167 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 SMYD5Q6GMV2 418 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 UNC5AQ6ZN44 842 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 TTC30AQ86WT1 665 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 LPIN3Q9BQK8 851 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 DCLRE1BQ9H816 532 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 NR2E3Q9Y5X4 410 aa15.41■□□□□ 0.06
ATG4B-220ENST00000482507 BCLAF3A2AJT9 711 aaKnown RBP15.4■□□□□ 0.06
ATG4B-220ENST00000482507 APOL1O14791 398 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 ZBED1O96006 694 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 MCF2P10911 925 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 ARF4P18085 180 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-220ENST00000482507 MAGEA6P43360 314 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 ATXN1P54253 815 aaKnown RBP15.4■□□□□ 0.06
ATG4B-220ENST00000482507 SESN3P58005 492 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 SLC10A2Q12908 348 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms