RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 FAM71BQ8TC56 605 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 DQX1Q8TE96 717 aaKnown RBP10.58□□□□□ -0.72
USP39-215ENST00000481409 HAPLN3Q96S86 360 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 PRKD2Q9BZL6 878 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 ZNF576Q9H609 170 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 WDCPQ9H6R7 721 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 FAM204AQ9H8W3 233 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 SFXN1Q9H9B4 322 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 MAN1C1Q9NR34 630 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 ASAH2Q9NR71 780 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 DDIT4Q9NX09 232 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 DONSONQ9NYP3 566 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.58□□□□□ -0.72
USP39-215ENST00000481409 DNMT3LQ9UJW3 386 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 MAGED2Q9UNF1 606 aaPredicted RBP10.58□□□□□ -0.72
USP39-215ENST00000481409 HCFC2Q9Y5Z7 792 aa10.58□□□□□ -0.72
USP39-215ENST00000481409 FAM170AA1A519 330 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 PGRMC1O00264 195 aaKnown RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 FANCGO15287 622 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 TLR5O60602 858 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 ZNF189O75820 626 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 LATS1O95835 1130 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 ZFXP17010 805 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 HOXB8P17481 243 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 HCAR3P49019 387 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 TAS2R40P59535 323 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 NRG1Q02297 640 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 KCNC3Q14003 757 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 TRIP4Q15650 581 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 DPYSL2Q16555 572 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 CDO1Q16878 200 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 TFDP3Q5H9I0 405 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 EFHC2Q5JST6 749 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 NUGGCQ68CJ6 796 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 TAC4Q86UU9 113 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 CREG2Q8IUH2 290 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 KCTD6Q8NC69 237 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 GDPD5Q8WTR4 605 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 NDRG1Q92597 394 aaKnown RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 EDEM1Q92611 657 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 MRPS31Q92665 395 aaKnown RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 ALG3Q92685 438 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 AZIN2Q96A70 460 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 PLD4Q96BZ4 506 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 C1orf74Q96LT6 269 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 ZNF670Q9BS34 389 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 LRRC3Q9BY71 257 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 FRMD8P1Q9BZ68 369 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 OSBPL2Q9H1P3 480 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 GOLPH3Q9H4A6 298 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 NMUR1Q9HB89 426 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 WDR6Q9NNW5 1121 aaKnown RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 RRAGDQ9NQL2 400 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 ARHGEF38Q9NXL2 777 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 MARCH2Q9P0N8 246 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 FZD10Q9ULW2 581 aa10.57□□□□□ -0.72
USP39-215ENST00000481409 PACSIN2Q9UNF0 486 aaPredicted RBP10.57□□□□□ -0.72
USP39-215ENST00000481409 GOLGA6L10A0A0M3HER8 536 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 CCDC188H7C350 402 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 TJP3O95049 919 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 OLFM2O95897 454 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 OAS1P00973 400 aaKnown RBP10.56□□□□□ -0.72
USP39-215ENST00000481409 IGLV3-27P01718 113 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 APOEP02649 317 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 RARAP10276 462 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 KDELR1P24390 212 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 WEE1P30291 646 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 ADRA1BP35368 520 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 TFDP2Q14188 446 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 TAZQ16635 292 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 ARHGAP15Q53QZ3 475 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 C10orf120Q5SQS8 335 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 ZFYVE27Q5T4F4 411 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 OTUD1Q5VV17 481 aaPredicted RBP10.56□□□□□ -0.72
USP39-215ENST00000481409 SCYL2Q6P3W7 929 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 SPRED2Q7Z698 418 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 DDX42Q86XP3 938 aaKnown RBP eCLIP10.56□□□□□ -0.72
USP39-215ENST00000481409 TMC8Q8IU68 726 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 EFHBQ8N7U6 833 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 ATP6V0D2Q8N8Y2 350 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 TTC13Q8NBP0 860 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 GPR152Q8TDT2 470 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 KRT35Q92764 455 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 SLC39A13Q96H72 371 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 RUNDC3BQ96NL0 473 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 NACA2Q9H009 215 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 ZWILCHQ9H900 591 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 IL21Q9HBE4 155 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 PIGVQ9NUD9 493 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 OSER1Q9NX31 292 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 AP4E1Q9UPM8 1137 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 ZNF510Q9Y2H8 683 aa10.56□□□□□ -0.72
USP39-215ENST00000481409 DENND4CQ5VZ89 1909 aa10.55□□□□□ -0.72
USP39-215ENST00000481409 LRRD1A4D1F6 860 aa10.55□□□□□ -0.72
USP39-215ENST00000481409 KCNU1A8MYU2 1149 aa10.55□□□□□ -0.72
USP39-215ENST00000481409 CEP104O60308 925 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms