RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TRIM59Q8IWR1 403 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 UNC45BQ8IWX7 931 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 CHPFQ8IZ52 775 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 PHTF2Q8N3S3 785 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 TATDN2Q93075 761 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 DDX50Q9BQ39 737 aaKnown RBP11.99□□□□□ -0.49
CCM2-213ENST00000480658 NMUR1Q9HB89 426 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 TMEM51Q9NW97 253 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 C2orf42Q9NWW7 574 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 OSER1Q9NX31 292 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCM2-213ENST00000480658 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 GTPBP10A4D1E9 387 aaKnown RBP11.98□□□□□ -0.49
CCM2-213ENST00000480658 M0QYV0 167 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 MAP3K13O43283 966 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 GREM1O60565 184 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 PENKP01210 267 aaPredicted RBP11.98□□□□□ -0.49
CCM2-213ENST00000480658 TGM1P22735 817 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 SLC6A11P48066 632 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 PXNP49023 591 aaPredicted RBP11.98□□□□□ -0.49
CCM2-213ENST00000480658 MFAP3P55082 362 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 ARID5AQ03989 594 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 RING1Q06587 406 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 LMAN2Q12907 356 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 NNTQ13423 1086 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 TPD52L1Q16890 204 aaPredicted RBP11.98□□□□□ -0.49
CCM2-213ENST00000480658 MPPE1Q53F39 396 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 PLA2G2CQ5R387 149 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
CCM2-213ENST00000480658 TPGS1Q6ZTW0 290 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 BEND5Q7L4P6 421 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 SCD5Q86SK9 330 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 KBTBD6Q86V97 674 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 C12orf40Q86WS4 652 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 TTC30AQ86WT1 665 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 FAM217AQ8IXS0 508 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 UBR7Q8N806 425 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 MDGA1Q8NFP4 955 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 OLIG1Q8TAK6 271 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 ERCC4Q92889 916 aaPredicted RBP11.98□□□□□ -0.49
CCM2-213ENST00000480658 DUSP15Q9H1R2 295 aaPredicted RBP11.98□□□□□ -0.49
CCM2-213ENST00000480658 ARRDC1-AS1Q9H2J1 176 aa11.98□□□□□ -0.49
CCM2-213ENST00000480658 PTPRZ1P23471 2315 aaPredicted RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 TCRBV21S2A2A0A5A6 115 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 HNRNPLP14866 589 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCM2-213ENST00000480658 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 SLC11A2P49281 568 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 CREB5Q02930 508 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 LRMPQ12912 555 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 SRSF5Q13243 272 aaKnown RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 TRIP4Q15650 581 aaPredicted RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 MPP7Q5T2T1 576 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 ISM2Q6H9L7 571 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 CYP2U1Q7Z449 544 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 CCDC117Q8IWD4 279 aaPredicted RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 CCDC33Q8N5R6 958 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 NAT16Q8N8M0 369 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 RBBP8NLQ8NC74 664 aaPredicted RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 STK32AQ8WU08 396 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 SLC35F5Q8WV83 523 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 AZIN2Q96A70 460 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 SERPINB11Q96P15 392 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 NOX5Q96PH1 765 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 GABRG3Q99928 467 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 SRRTQ9BXP5 876 aaKnown RBP11.97□□□□□ -0.49
CCM2-213ENST00000480658 ULBP1Q9BZM6 244 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 FBRSQ9HAH7 460 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 STOML2Q9UJZ1 356 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 MYH10P35580 1976 aa11.97□□□□□ -0.49
CCM2-213ENST00000480658 FRYLO94915 3013 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 SLC12A8A0AV02 714 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 BCLAF3A2AJT9 711 aaKnown RBP11.96□□□□□ -0.49
CCM2-213ENST00000480658 SGK1O00141 431 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 BIN1O00499 593 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 SCAMP3O14828 347 aaKnown RBP11.96□□□□□ -0.49
CCM2-213ENST00000480658 KHNYNO15037 678 aaKnown RBP11.96□□□□□ -0.49
CCM2-213ENST00000480658 CAVIN2O95810 425 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 KRT5P13647 590 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 P2RY2P41231 377 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 ATXN1P54253 815 aaKnown RBP11.96□□□□□ -0.49
CCM2-213ENST00000480658 DAOAP59103 153 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 PKDCCQ504Y2 493 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 ADGRF1Q5T601 910 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 DAB2IPQ5VWQ8 1189 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 BSPRYQ5W0U4 402 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 MSANTD2Q6P1R3 559 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 GBP6Q6ZN66 633 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 DENND1CQ8IV53 801 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 FMNL3Q8IVF7 1028 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 CEP76Q8TAP6 659 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 WFIKKN2Q8TEU8 576 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 DDI1Q8WTU0 396 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 HMGB4Q8WW32 186 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 MED15Q96RN5 788 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 TPSD1Q9BZJ3 242 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 INTS2Q9H0H0 1204 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms