RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 BTKQ06187 659 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 STX4Q12846 297 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 TMEM26Q6ZUK4 368 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 ERO1BQ86YB8 467 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 KCTD10Q9H3F6 313 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 RAD51BO15315 384 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 GUCY1B2O75343 617 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 STAU1O95793 577 aaKnown RBP9.8□□□□□ -0.84
VEGFA-212ENST00000480614 THPOP40225 353 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 KLHL24Q6TFL4 600 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 EPHX4Q8IUS5 362 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 ATG16L2Q8NAA4 619 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 CHST12Q9NRB3 414 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 THG1LQ9NWX6 298 aaKnown RBP9.8□□□□□ -0.84
VEGFA-212ENST00000480614 CLPTM1O96005 669 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 NAMPTP43490 491 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 ZBTB49Q6ZSB9 765 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 UBE2E3Q969T4 207 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 PIPSLA2A3N6 862 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 SUPT7LO94864 414 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 TARSP26639 723 aaKnown RBP9.8□□□□□ -0.84
VEGFA-212ENST00000480614 MAPKAPK2P49137 400 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 PRKAA1Q13131 559 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 CCDC149Q6ZUS6 474 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 STRA8Q7Z7C7 330 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 SH2D3CQ8N5H7 860 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 ENKURQ8TC29 256 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 ZNF668Q96K58 619 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-212ENST00000480614 CHP1Q99653 195 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 HMG20AQ9NP66 347 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 ENTPD7Q9NQZ7 604 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 MBD5Q9P267 1494 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 A0A0A6YYK5 440 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-212ENST00000480614 URODP06132 367 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 PCNAP12004 261 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 CASP12Q6UXS9 341 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 KIF2BQ8N4N8 673 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 FAM151AQ8WW52 585 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 QRFPRQ96P65 431 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 FAM111AQ96PZ2 611 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 MROH8Q9H579 483 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 AKAP6Q13023 2319 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 PDHBP11177 359 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 TLK2Q86UE8 772 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 TMEM132CQ8N3T6 1108 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 KLHL25Q9H0H3 589 aa9.8□□□□□ -0.84
VEGFA-212ENST00000480614 CYP11B2P19099 503 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 SERPINB5P36952 375 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 MGAT5Q09328 741 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 NDUFAF6Q330K2 333 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ARRDC4Q8NCT1 418 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 TBCBQ99426 244 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 MYLK2Q9H1R3 596 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PCDHB12Q9Y5F1 795 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ZNF638Q14966 1978 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 TRIM25Q14258 630 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 RABL6Q3YEC7 729 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 RSBN1Q5VWQ0 802 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 RPRD1AQ96P16 312 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ACTR8Q9H981 624 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 AKAP7Q9P0M2 348 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 VANGL2Q9ULK5 521 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PCM1Q15154 2024 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 OGTO15294 1046 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 CYP11B1P15538 503 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 NQO1P15559 274 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 RAB27AP51159 221 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PDZK1Q5T2W1 519 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 FBXW10Q5XX13 1052 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 GALNT8Q9NY28 637 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 HEY2Q9UBP5 337 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 SPTBP11277 2137 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 KLHL41O60662 606 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ITGB3P05106 788 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 HNRNPH1P31943 449 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 FLT3P36888 993 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 C11orf74Q86VG3 221 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ACTRT1Q8TDG2 376 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 KIFC1Q9BW19 673 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PLA2G6O60733 806 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PAICSP22234 425 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 LRRC49Q8IUZ0 686 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 TBC1D16Q8TBP0 767 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 MAGEC3Q8TD91 643 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ZIM3Q96PE6 472 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 NFKBIZQ9BYH8 718 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ACOT9Q9Y305 439 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 A0A087WZ62 844 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 CKMP06732 381 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 MYBPC2Q14324 1141 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 NR6A1Q15406 480 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ALG11Q2TAA5 492 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ZNF280DQ6N043 979 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PROX1Q92786 737 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 VPS28Q9UK41 221 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 DDX39BQ13838 428 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 HLA-DQA1Q5Y7H0 255 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms