RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 C6orf118Q5T5N4 469 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 TNIP3Q96KP6 325 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 NDNQ99608 321 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 NGRNQ9NPE2 291 aaKnown RBP17.44■□□□□ 0.38
SH3D21-203ENST00000480549 TLDC2A0PJX2 215 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 TMEM88BA6NKF7 163 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 GABRDO14764 452 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 ALDH1A1P00352 501 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 IL4RP24394 825 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 SCNN1AP37088 669 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 ERMARDQ5T6L9 678 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 RNASEH2BQ5TBB1 312 aaKnown RBP17.44■□□□□ 0.38
SH3D21-203ENST00000480549 FBF1Q8TES7 1133 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 FOXP3Q9BZS1 431 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 SMIM23A6NLE4 172 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 LCP1P13796 627 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 PTPN9P43378 593 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 AUHQ13825 339 aaKnown RBP17.43■□□□□ 0.38
SH3D21-203ENST00000480549 ITIH4Q14624 930 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 LBRQ14739 615 aaKnown RBP17.43■□□□□ 0.38
SH3D21-203ENST00000480549 KIAA0319Q5VV43 1072 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 WSCD1Q658N2 575 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 AGMOQ6ZNB7 445 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 ARCQ7LC44 396 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 CROCCP2Q86T23 111 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 MIPOL1Q8TD10 442 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 HNRNPABQ99729 332 aaKnown RBP17.43■□□□□ 0.38
SH3D21-203ENST00000480549 ROPN1BQ9BZX4 212 aaPredicted RBP17.43■□□□□ 0.38
SH3D21-203ENST00000480549 ROPN1Q9HAT0 212 aaPredicted RBP17.43■□□□□ 0.38
SH3D21-203ENST00000480549 SLC38A7Q9NVC3 462 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 BRCA2P51587 3418 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 hCG_2014768A0A024R1R8 64 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 MFSD5Q6N075 450 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 PAQR9Q6ZVX9 377 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 CENPIQ92674 756 aaPredicted RBP17.43■□□□□ 0.38
SH3D21-203ENST00000480549 HSFY1Q96LI6 401 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 GPATCH2LQ9NWQ4 482 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 PHF24Q9UPV7 400 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 TSC2P49815 1807 aa17.43■□□□□ 0.38
SH3D21-203ENST00000480549 SMAPO00193 183 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 RASGRF2O14827 1237 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 ELNP15502 786 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 ACAT1P24752 427 aaKnown RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 SLCO1A2P46721 670 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 IFI35P80217 286 aaPredicted RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 MORF4L2Q15014 288 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 BOLA3Q53S33 107 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 NPNTQ6UXI9 565 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 SNRNP25Q9BV90 132 aaKnown RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 RNF186Q9NXI6 227 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 ARL5CA6NH57 179 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 XPO1O14980 1071 aaKnown RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 RGS16O15492 202 aaPredicted RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 ZNF189O75820 626 aaPredicted RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 IFNB1P01574 187 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 CHN1P15882 459 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 CST5P28325 142 aaPredicted RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 ACADSBP45954 432 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 CLCNKBP51801 687 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 CCNG1P51959 295 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 CA9Q16790 459 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 SCYL2Q6P3W7 929 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 MRPL10Q7Z7H8 261 aaKnown RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 UNC45BQ8IWX7 931 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 C3orf58Q8NDZ4 430 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 RNF157Q96PX1 679 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 RBM15Q96T37 977 aaKnown RBP eCLIP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 GPR182O15218 404 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 MGEA5O60502 916 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 AGTP01019 485 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 THP07101 528 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 PTPN1P18031 435 aaKnown RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 THPOP40225 353 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 IFNAR2P48551 515 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 EIF3EP60228 445 aaKnown RBP17.42■□□□□ 0.38
SH3D21-203ENST00000480549 MPP3Q13368 585 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 PDK2Q15119 407 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 NOMO1Q15155 1222 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 LONRF1Q17RB8 773 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 TBCBQ99426 244 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 DUSP16Q9BY84 665 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 DNAI2Q9GZS0 605 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 VCXQ9H320 206 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 PCDH18Q9HCL0 1135 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 GIT1Q9Y2X7 761 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 LRRC42Q9Y546 428 aa17.42■□□□□ 0.38
SH3D21-203ENST00000480549 TDRD15B5MCY1 1934 aaKnown RBP17.41■□□□□ 0.38
SH3D21-203ENST00000480549 CLDN5O00501 218 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 MDM4O15151 490 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 RPLP2P05387 115 aaKnown RBP17.41■□□□□ 0.38
SH3D21-203ENST00000480549 PIGZQ86VD9 579 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 HACE1Q8IYU2 909 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 SPATA18Q8TC71 538 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 UCMAQ8WVF2 138 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 SENP8Q96LD8 212 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 C9orf72Q96LT7 481 aa17.41■□□□□ 0.38
SH3D21-203ENST00000480549 ZNF317Q96PQ6 595 aaPredicted RBP17.41■□□□□ 0.38
SH3D21-203ENST00000480549 PADI3Q9ULW8 664 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms