RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TAS2R14Q9NYV8 317 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 ADAMTS1Q9UHI8 967 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 SFMBT1Q9UHJ3 866 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 TMEM59LQ9UK28 342 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 SLC12A8A0AV02 714 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 IFNAR2P48551 515 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 EML3Q32P44 896 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 DCAF6Q58WW2 860 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 Q6ZNB5 142 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 ATP2A3Q93084 1043 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 TRIM11Q96F44 468 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 ZFYVE19Q96K21 471 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.59■□□□□ 0.89
LIME1-205ENST00000480139 IMPACTQ9P2X3 320 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 TLR6Q9Y2C9 796 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 ZNF510Q9Y2H8 683 aa20.59■□□□□ 0.89
LIME1-205ENST00000480139 A0A087X0T9 212 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 TCRBV5S1A1TA0A578 114 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 FAM170AA1A519 330 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 GOLGA8SH3BPF8 625 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 GRAP2O75791 330 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 LATS1O95835 1130 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 FAM228BP0C875 321 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 IRF1P10914 325 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 GLULP15104 373 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 EIF4A3P38919 411 aaKnown RBP20.58■□□□□ 0.89
LIME1-205ENST00000480139 EIF4EBP2Q13542 120 aaPredicted RBP20.58■□□□□ 0.89
LIME1-205ENST00000480139 ASTE1Q2TB18 679 aaPredicted RBP20.58■□□□□ 0.89
LIME1-205ENST00000480139 TAC4Q86UU9 113 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 TTC16Q8NEE8 873 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 CSGALNACT1Q8TDX6 532 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 NT5C3BQ969T7 300 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 WBP2Q969T9 261 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 MSANTD3Q96H12 275 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 HPS4Q9NQG7 708 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.58■□□□□ 0.89
LIME1-205ENST00000480139 STAP1Q9ULZ2 295 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 NENFQ9UMX5 172 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 WNT6Q9Y6F9 365 aa20.58■□□□□ 0.89
LIME1-205ENST00000480139 COL4A3Q01955 1670 aa20.58■□□□□ 0.88
LIME1-205ENST00000480139 IRAK2O43187 625 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 MSI1O43347 362 aaKnown RBP20.57■□□□□ 0.88
LIME1-205ENST00000480139 NFATC1O95644 943 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 TRUB2O95900 331 aaKnown RBP20.57■□□□□ 0.88
LIME1-205ENST00000480139 FTLP02792 175 aaPredicted RBP20.57■□□□□ 0.88
LIME1-205ENST00000480139 MYBL1P10243 752 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 RUNX3Q13761 415 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 SLC18A3Q16572 532 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 NUGGCQ68CJ6 796 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 TRIM67Q6ZTA4 783 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 PGAP3Q96FM1 320 aaPredicted RBP20.57■□□□□ 0.88
LIME1-205ENST00000480139 SLC39A13Q96H72 371 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 PANX2Q96RD6 677 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 NPY6RQ99463 290 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 DDX23Q9BUQ8 820 aaKnown RBP20.57■□□□□ 0.88
LIME1-205ENST00000480139 METTL5Q9NRN9 209 aaKnown RBP20.57■□□□□ 0.88
LIME1-205ENST00000480139 CUL9Q8IWT3 2517 aa20.57■□□□□ 0.88
LIME1-205ENST00000480139 GOLGA6L3A6NEY3 463 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 SIGLEC16A6NMB1 481 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 TMCO5BA8MYB1 307 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 KLKB1P03952 638 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 KRT3P12035 628 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 RRM1P23921 792 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 CORO1AP31146 461 aaKnown RBP20.56■□□□□ 0.88
LIME1-205ENST00000480139 GBP1P32455 592 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 FLT3P36888 993 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 HARS2P49590 506 aaKnown RBP20.56■□□□□ 0.88
LIME1-205ENST00000480139 TBX4P57082 545 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 PRKCQQ04759 706 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 TNK2Q07912 1038 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 ITPRIPL2Q3MIP1 535 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 SLC25A52Q3SY17 297 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 SLC44A4Q53GD3 710 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 PPP1R15BQ5SWA1 713 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 TRIM68Q6AZZ1 485 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 DNAJC24Q6P3W2 148 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 ALKBH5Q6P6C2 394 aaKnown RBP20.56■□□□□ 0.88
LIME1-205ENST00000480139 UNC45BQ8IWX7 931 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 BBS7Q8IWZ6 715 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 ADGRG2Q8IZP9 1017 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 CPA6Q8N4T0 437 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 AZIN2Q96A70 460 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 SELENOOQ9BVL4 669 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 LINC00597Q9H2U6 94 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 DEF6Q9H4E7 631 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 EBF3Q9H4W6 596 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 GRPEL1Q9HAV7 217 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 ARHGEF3Q9NR81 526 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 STOML2Q9UJZ1 356 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 FBXL21Q9UKT6 434 aa20.56■□□□□ 0.88
LIME1-205ENST00000480139 HMBSP08397 361 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 ARSAP15289 507 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 FECHP22830 423 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 RNASE9P60153 205 aaKnown RBP20.55■□□□□ 0.88
LIME1-205ENST00000480139 PITX1P78337 314 aaPredicted RBP20.55■□□□□ 0.88
LIME1-205ENST00000480139 MTA1Q13330 715 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 MLF2Q15773 248 aaPredicted RBP20.55■□□□□ 0.88
LIME1-205ENST00000480139 PLEKHA7Q6IQ23 1121 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 C1orf228Q6PIY5 440 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 BNIPLQ7Z465 357 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms