RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 ASB16Q96NS5 453 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 CNPY3Q9BT09 278 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 SMOC2Q9H3U7 446 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 GKN1Q9NS71 199 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 DDIT4Q9NX09 232 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 ANAPC7Q9UJX3 599 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 ARHGAP26Q9UNA1 814 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 TFR2Q9UP52 801 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 CPQQ9Y646 472 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 PATJQ8NI35 1801 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 GREB1Q4ZG55 1949 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 DOCK6Q96HP0 2047 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 SYNJ2BP-COX16A0A087WUM0 186 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 F9P00740 461 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 HMBSP08397 361 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 IL9P15248 144 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 PSMA2P25787 234 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 PTPN9P43378 593 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 SULT1E1P49888 294 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 KCNQ1P51787 676 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 NAP1L1P55209 391 aaKnown RBP11.67□□□□□ -0.54
CLDN11-205ENST00000480067 DEUP1Q05D60 604 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 TRNP1Q6NT89 227 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLDN11-205ENST00000480067 TAC4Q86UU9 113 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLDN11-205ENST00000480067 CELF5Q8N6W0 485 aaKnown RBP11.67□□□□□ -0.54
CLDN11-205ENST00000480067 FNIP1Q8TF40 1166 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
CLDN11-205ENST00000480067 NT5C3BQ969T7 300 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 TBCBQ99426 244 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 NPY6RQ99463 290 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 KLF16Q9BXK1 252 aaPredicted RBP11.67□□□□□ -0.54
CLDN11-205ENST00000480067 TRIM7Q9C029 511 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 ZFP14Q9HCL3 533 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 OSGEPQ9NPF4 335 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 TMEM51Q9NW97 253 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 COX16Q9P0S2 106 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 EPS15L1Q9UBC2 864 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 IP6K2Q9UHH9 426 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 CCL26Q9Y258 94 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
CLDN11-205ENST00000480067 HBS1LQ9Y450 684 aaKnown RBP11.67□□□□□ -0.54
CLDN11-205ENST00000480067 A0A0A6YYK5 440 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 C2CD4DB7Z1M9 353 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 MSI1O43347 362 aaKnown RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 RNF8O76064 485 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 PRAMEF12O95522 483 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 SLC2A3P11169 496 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 VIPR2P41587 438 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 HARS2P49590 506 aaKnown RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 TBX4P57082 545 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 PITX1P78337 314 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 TCEAL1Q15170 157 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 TRIP4Q15650 581 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 CDO1Q16878 200 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 C15orf59Q2T9L4 293 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 MTSS1LQ765P7 747 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 SH3RF2Q8TEC5 729 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 FAM172AQ8WUF8 416 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 PGAP3Q96FM1 320 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 CALR3Q96L12 384 aaKnown RBP11.66□□□□□ -0.54
CLDN11-205ENST00000480067 TSGA10Q9BZW7 698 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 LACRTQ9GZZ8 138 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 TRPV4Q9HBA0 871 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 LCMT1Q9UIC8 334 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 PPP2R2CQ9Y2T4 447 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 DUSP10Q9Y6W6 482 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 NOTCH4Q99466 2003 aa11.66□□□□□ -0.54
CLDN11-205ENST00000480067 ZNF638Q14966 1978 aaKnown RBP11.65□□□□□ -0.54
CLDN11-205ENST00000480067 C2orf16Q68DN1 1984 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 BTNL10A8MVZ5 291 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 LEFTY2O00292 366 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 PJA2O43164 708 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 ZSCAN12O43309 604 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 KRT86O43790 486 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 MTA2O94776 668 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 IGLV3-25P01717 112 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 IRF1P10914 325 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 TFE3P19532 575 aaPredicted RBP11.65□□□□□ -0.54
CLDN11-205ENST00000480067 CCR1P32246 355 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 RDXP35241 583 aaKnown RBP11.65□□□□□ -0.54
CLDN11-205ENST00000480067 ARHGAP25P42331 645 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 ZXDBP98169 803 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 OGDHQ02218 1023 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 RING1Q06587 406 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 NNTQ13423 1086 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 ACAP1Q15027 740 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 SH3PXD2AQ5TCZ1 1133 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 TANGO2Q6ICL3 276 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 CC2D1AQ6P1N0 951 aaPredicted RBP11.65□□□□□ -0.54
CLDN11-205ENST00000480067 PARM1Q6UWI2 310 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 STRADAQ7RTN6 431 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 UNC45BQ8IWX7 931 aa11.65□□□□□ -0.54
CLDN11-205ENST00000480067 ST13P5Q8NFI4 369 aaPredicted RBP11.65□□□□□ -0.54
CLDN11-205ENST00000480067 CENPIQ92674 756 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms